Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
ABCA3Q99758 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.97□□□□□ -2.09
ABCA3Q99758 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.97□□□□□ -2.09
ABCA3Q99758 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA3Q99758 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA3Q99758 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 PSMA2P3-201ENST00000429685 675 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 RPL30P11-201ENST00000495304 339 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA3Q99758 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ABCA3Q99758 MTCO3P44-201ENST00000510977 541 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA3Q99758 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ABCA3Q99758 AC024614.2-201ENST00000577584 372 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 GLUD1P4-201ENST00000590914 418 ntBASIC1.97□□□□□ -2.09
ABCA3Q99758 AC073055.1-201ENST00000456901 1621 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 SNORA6-201ENST00000384033 151 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 RNU6-532P-201ENST00000384318 107 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
ABCA3Q99758 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA3Q99758 AC241520.1-201ENST00000422654 1099 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 AC096632.1-201ENST00000427395 310 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA3Q99758 snoU109.4-201ENST00000458953 143 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
ABCA3Q99758 MRPL42P6-201ENST00000486397 371 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA3Q99758 AC034222.1-201ENST00000494052 532 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.96□□□□□ -2.1
ABCA3Q99758 MIR4285-201ENST00000581001 85 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.96□□□□□ -2.1
ABCA3Q99758 AL161734.1-201ENST00000609720 557 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 AC068831.7-201ENST00000616954 363 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 AL133370.2-201ENST00000619934 439 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 MTCO1P4-201ENST00000520516 1409 ntBASIC1.96□□□□□ -2.1
ABCA3Q99758 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
ABCA3Q99758 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ABCA3Q99758 Y_RNA.205-201ENST00000364128 113 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 MIR627-201ENST00000384979 97 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 RNA5SP489-201ENST00000410986 109 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.95□□□□□ -2.1
ABCA3Q99758 AL513185.2-201ENST00000425543 193 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.95□□□□□ -2.1
ABCA3Q99758 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.95□□□□□ -2.1
ABCA3Q99758 TPMTP4-201ENST00000450749 678 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.95□□□□□ -2.1
ABCA3Q99758 RPS29P20-201ENST00000489592 171 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.95□□□□□ -2.1
ABCA3Q99758 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.95□□□□□ -2.1
ABCA3Q99758 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.95□□□□□ -2.1
ABCA3Q99758 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.95□□□□□ -2.1
ABCA3Q99758 AC011712.1-201ENST00000588959 234 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 VN1R81P-201ENST00000602085 372 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 AL391646.1-201ENST00000603860 190 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 AL158801.5-201ENST00000623123 465 ntBASIC1.95□□□□□ -2.1
ABCA3Q99758 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ABCA3Q99758 RNU6-629P-201ENST00000384061 103 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 AL591034.1-201ENST00000407447 340 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCA3Q99758 COX6CP14-201ENST00000469580 174 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 MTND3P6-201ENST00000485242 339 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 MTCO3P35-201ENST00000485582 781 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.94□□□□□ -2.1
ABCA3Q99758 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCA3Q99758 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCA3Q99758 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.94□□□□□ -2.1
ABCA3Q99758 MIR3935-201ENST00000583472 104 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 BNIP3P4-201ENST00000604946 565 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 AL138880.2-201ENST00000616214 239 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 AL133216.2-202ENST00000634512 349 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 DDX10P1-201ENST00000448545 1933 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
ABCA3Q99758 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
ABCA3Q99758 HSPE1P11-201ENST00000339579 310 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 AL023807.1-201ENST00000407932 359 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 MTND2P29-201ENST00000438595 412 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 RNU7-27P-201ENST00000459281 62 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 AC125611.2-201ENST00000551907 647 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 RPL21P5-201ENST00000554662 472 ntBASIC1.94□□□□□ -2.1
ABCA3Q99758 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.94□□□□□ -2.1
ABCA3Q99758 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.94□□□□□ -2.1
ABCA3Q99758 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
ABCA3Q99758 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ABCA3Q99758 RNU4-51P-201ENST00000364206 140 ntBASIC1.93□□□□□ -2.1
ABCA3Q99758 SRIP3-201ENST00000413200 219 ntBASIC1.93□□□□□ -2.1
ABCA3Q99758 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.93□□□□□ -2.1
ABCA3Q99758 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.93□□□□□ -2.1
ABCA3Q99758 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.93□□□□□ -2.1
ABCA3Q99758 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
ABCA3Q99758 MTATP6P3-201ENST00000581686 676 ntBASIC1.93□□□□□ -2.1
ABCA3Q99758 AP003117.1-201ENST00000602771 554 ntBASIC1.93□□□□□ -2.1
ABCA3Q99758 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.93□□□□□ -2.1
ABCA3Q99758 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
ABCA3Q99758 RNU1-22P-201ENST00000363334 158 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 RNU6-317P-201ENST00000384031 107 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 GTF2IP7-202ENST00000436677 309 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 MTCYBP18-201ENST00000501056 747 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.92□□□□□ -2.1
ABCA3Q99758 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms