Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC008850.1-201ENST00000427546 362 ntBASIC1.09□□□□□ -2.23
COL12A1Q99715 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
COL12A1Q99715 SNRPGP13-201ENST00000442212 177 ntBASIC1.09□□□□□ -2.23
COL12A1Q99715 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.09□□□□□ -2.23
COL12A1Q99715 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.09□□□□□ -2.23
COL12A1Q99715 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.09□□□□□ -2.23
COL12A1Q99715 AL030996.1-201ENST00000411430 235 ntBASIC1.09□□□□□ -2.24
COL12A1Q99715 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.09□□□□□ -2.24
COL12A1Q99715 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.09□□□□□ -2.24
COL12A1Q99715 AC096571.1-202ENST00000506634 735 ntBASIC1.09□□□□□ -2.24
COL12A1Q99715 AC006499.2-201ENST00000513470 337 ntBASIC1.09□□□□□ -2.24
COL12A1Q99715 DNAJC8P1-201ENST00000554535 372 ntBASIC1.09□□□□□ -2.24
COL12A1Q99715 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.09□□□□□ -2.24
COL12A1Q99715 AL031775.1-201ENST00000607014 887 ntBASIC1.09□□□□□ -2.24
COL12A1Q99715 AP000560.1-201ENST00000624150 1937 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 AC016769.3-201ENST00000396562 315 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 HMGB1P13-201ENST00000406019 642 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.08□□□□□ -2.24
COL12A1Q99715 Z85994.2-201ENST00000434327 452 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 AL139109.1-201ENST00000455491 297 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 HSPE1P4-201ENST00000550617 308 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 AL590099.1-201ENST00000615276 138 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 MIR338-201ENST00000636369 67 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL12A1Q99715 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.08□□□□□ -2.24
COL12A1Q99715 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.08□□□□□ -2.24
COL12A1Q99715 AC244636.1-201ENST00000421152 228 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.08□□□□□ -2.24
COL12A1Q99715 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.08□□□□□ -2.24
COL12A1Q99715 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.08□□□□□ -2.24
COL12A1Q99715 AC118942.1-201ENST00000529674 1035 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL12A1Q99715 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
COL12A1Q99715 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.08□□□□□ -2.24
COL12A1Q99715 AC121758.2-201ENST00000553271 193 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
COL12A1Q99715 AC135776.4-201ENST00000624300 1904 ntBASIC1.08□□□□□ -2.24
COL12A1Q99715 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
COL12A1Q99715 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL12A1Q99715 Y_RNA.167-201ENST00000363735 109 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 RNU2-37P-201ENST00000410695 177 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 RNA5SP489-201ENST00000410986 109 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 AC109583.1-201ENST00000432156 268 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 AC004022.1-201ENST00000447766 1066 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.07□□□□□ -2.24
COL12A1Q99715 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL12A1Q99715 SNORD114-23-201ENST00000363536 72 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.07□□□□□ -2.24
COL12A1Q99715 AL596276.1-201ENST00000434465 418 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 IMMP1LP2-201ENST00000552954 492 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 MIR4723-201ENST00000585070 81 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.07□□□□□ -2.24
COL12A1Q99715 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
COL12A1Q99715 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
COL12A1Q99715 RNA5SP393-201ENST00000363423 117 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
COL12A1Q99715 AL357078.2-201ENST00000416486 427 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 AC092754.2-201ENST00000463506 460 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 SNRPGP3-201ENST00000469405 227 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 RPS26P21-201ENST00000475397 348 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 RPS27AP10-201ENST00000496103 208 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 AC008427.1-201ENST00000503102 655 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.07□□□□□ -2.24
COL12A1Q99715 AC006270.2-201ENST00000578523 652 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 VN1R107P-201ENST00000601784 209 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 DUXAP3-201ENST00000603616 594 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 AC073413.2-201ENST00000604332 360 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.07□□□□□ -2.24
COL12A1Q99715 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.07□□□□□ -2.24
COL12A1Q99715 MIR924-201ENST00000638017 53 ntBASIC1.07□□□□□ -2.24
COL12A1Q99715 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.06□□□□□ -2.24
COL12A1Q99715 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.06□□□□□ -2.24
COL12A1Q99715 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.06□□□□□ -2.24
COL12A1Q99715 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.06□□□□□ -2.24
COL12A1Q99715 OR51B8P-201ENST00000449892 769 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 OR9N1P-202ENST00000494289 481 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 MTND4LP22-201ENST00000508209 276 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.06□□□□□ -2.24
COL12A1Q99715 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC1.06□□□□□ -2.24
COL12A1Q99715 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
COL12A1Q99715 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.06□□□□□ -2.24
COL12A1Q99715 DEFB108F-201ENST00000344638 222 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 RNA5SP295-201ENST00000362655 121 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 RNU6-603P-201ENST00000411403 107 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 AC073264.1-201ENST00000411508 416 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 AC234064.1-201ENST00000436312 247 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 AC093752.1-206ENST00000511823 336 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 RNA5SP82-201ENST00000516707 92 ntBASIC1.06□□□□□ -2.24
COL12A1Q99715 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.06□□□□□ -2.24
COL12A1Q99715 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
COL12A1Q99715 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
COL12A1Q99715 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.06□□□□□ -2.24
COL12A1Q99715 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
COL12A1Q99715 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.05□□□□□ -2.24
COL12A1Q99715 EEF1B2P4-201ENST00000551398 348 ntBASIC1.05□□□□□ -2.24
COL12A1Q99715 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.05□□□□□ -2.24
COL12A1Q99715 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.05□□□□□ -2.24
COL12A1Q99715 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.05□□□□□ -2.24
COL12A1Q99715 AC090740.1-201ENST00000623193 2262 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms