Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC024614.2-201ENST00000577584 372 ntBASIC2.42□□□□□ -2.02
TOPBP1Q92547 AC090616.5-202ENST00000582111 297 ntBASIC2.42□□□□□ -2.02
TOPBP1Q92547 AC113368.1-201ENST00000603736 382 ntBASIC2.42□□□□□ -2.02
TOPBP1Q92547 AC025048.6-202ENST00000627667 438 ntBASIC2.42□□□□□ -2.02
TOPBP1Q92547 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 NUP58P1-201ENST00000502546 1738 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 SNORA51.2-201ENST00000364595 132 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 SNRPEP2-201ENST00000397592 279 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 AL138880.1-201ENST00000405824 642 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 RNU2-71P-201ENST00000411395 189 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 MTND2P29-201ENST00000438595 412 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 RPS15AP1-201ENST00000457423 391 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 snoU13.7-201ENST00000459220 104 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 BLNK-209ENST00000495266 440 ntTSL 5 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 AC006390.1-201ENST00000508068 283 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 MTCO2P32-201ENST00000514865 403 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 RNU6-491P-201ENST00000516099 110 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 AL137100.2-201ENST00000555786 315 ntBASIC2.41□□□□□ -2.02
TOPBP1Q92547 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.41□□□□□ -2.02
TOPBP1Q92547 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
TOPBP1Q92547 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TOPBP1Q92547 Y_RNA.36-201ENST00000362602 112 ntBASIC2.4□□□□□ -2.03
TOPBP1Q92547 U8.1-201ENST00000362843 134 ntBASIC2.4□□□□□ -2.03
TOPBP1Q92547 SNORA7.2-201ENST00000364446 145 ntBASIC2.4□□□□□ -2.03
TOPBP1Q92547 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.4□□□□□ -2.03
TOPBP1Q92547 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.4□□□□□ -2.03
TOPBP1Q92547 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.4□□□□□ -2.03
TOPBP1Q92547 AC092991.1-201ENST00000477176 376 ntBASIC2.4□□□□□ -2.03
TOPBP1Q92547 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
TOPBP1Q92547 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.4□□□□□ -2.03
TOPBP1Q92547 AP005660.1-201ENST00000522972 293 ntBASIC2.4□□□□□ -2.03
TOPBP1Q92547 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.4□□□□□ -2.03
TOPBP1Q92547 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.4□□□□□ -2.03
TOPBP1Q92547 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
TOPBP1Q92547 AL513321.1-201ENST00000441175 761 ntBASIC2.39□□□□□ -2.03
TOPBP1Q92547 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.39□□□□□ -2.03
TOPBP1Q92547 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.39□□□□□ -2.03
TOPBP1Q92547 HMGN2P16-201ENST00000456802 261 ntBASIC2.39□□□□□ -2.03
TOPBP1Q92547 RPL21P104-201ENST00000464143 478 ntBASIC2.39□□□□□ -2.03
TOPBP1Q92547 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.39□□□□□ -2.03
TOPBP1Q92547 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC2.39□□□□□ -2.03
TOPBP1Q92547 YWHAQP7-201ENST00000603536 658 ntBASIC2.39□□□□□ -2.03
TOPBP1Q92547 AC090617.7-201ENST00000623952 126 ntBASIC2.39□□□□□ -2.03
TOPBP1Q92547 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
TOPBP1Q92547 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TOPBP1Q92547 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
TOPBP1Q92547 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.39□□□□□ -2.03
TOPBP1Q92547 AL596028.1-201ENST00000326971 197 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC2.38□□□□□ -2.03
TOPBP1Q92547 MIR421-201ENST00000365696 85 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 ERHP2-201ENST00000402323 299 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 NUP35P2-201ENST00000416748 943 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC2.38□□□□□ -2.03
TOPBP1Q92547 NF1P3-201ENST00000457709 450 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.38□□□□□ -2.03
TOPBP1Q92547 MTCYBP18-201ENST00000501056 747 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.38□□□□□ -2.03
TOPBP1Q92547 AL731537.2-201ENST00000561565 951 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.38□□□□□ -2.03
TOPBP1Q92547 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
TOPBP1Q92547 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
TOPBP1Q92547 HSPE1P11-201ENST00000339579 310 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 HMGN2P19-201ENST00000425149 265 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 LAMTOR3P1-201ENST00000428620 370 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 MTCYBP37-201ENST00000510642 1133 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 BNIP3P4-201ENST00000604946 565 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 BNIP3P7-201ENST00000605641 516 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 AC091895.1-201ENST00000624494 256 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 RPL21P66-201ENST00000426566 466 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 Z77249.1-201ENST00000444622 1175 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 RNU6-56P-201ENST00000516986 93 ntBASIC2.37□□□□□ -2.03
TOPBP1Q92547 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.37□□□□□ -2.03
TOPBP1Q92547 MAPK10-266ENST00000641066 6555 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 RNU6-629P-201ENST00000384061 103 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 SRIP3-201ENST00000413200 219 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 RFESDP1-201ENST00000422350 461 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 AL445669.1-201ENST00000426743 755 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC2.36□□□□□ -2.03
TOPBP1Q92547 HMGB1P38-201ENST00000490557 577 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.36□□□□□ -2.03
TOPBP1Q92547 AC008885.2-201ENST00000509506 930 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 AF131216.2-201ENST00000512316 564 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 AC008494.2-201ENST00000514544 370 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.36□□□□□ -2.03
TOPBP1Q92547 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.36□□□□□ -2.03
TOPBP1Q92547 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
TOPBP1Q92547 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms