Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 SNORA31.20-201ENST00000517111 133 ntBASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 OR4T1P-201ENST00000554933 911 ntBASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 AC087481.2-201ENST00000565492 330 ntBASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 OR4K8P-201ENST00000578842 1048 ntBASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 AC121334.2-201ENST00000605387 271 ntBASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 PISRT1-201ENST00000626175 531 ntBASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 AC118273.1-201ENST00000525324 3006 ntBASIC3.41□□□□□ -1.86
SLC44A1Q8WWI5 AL021368.2-201ENST00000606125 5352 ntBASIC3.4□□□□□ -1.86
SLC44A1Q8WWI5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SLC44A1Q8WWI5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 SNORA71.3-201ENST00000362582 128 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-1042P-201ENST00000384204 107 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 CCNG1P1-201ENST00000406783 885 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RNU2-66P-201ENST00000410650 161 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 CRYBB2P1-203ENST00000415709 538 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AL672296.1-201ENST00000427780 2158 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC010975.2-201ENST00000427781 588 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RPL35AP22-201ENST00000436855 335 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 ATP5C1P1-201ENST00000441945 895 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AL121871.1-201ENST00000443413 436 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 TPT1P14-201ENST00000448018 505 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AL358232.1-201ENST00000448030 501 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 GAPDHP17-201ENST00000449858 1001 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RPS27P29-201ENST00000463110 252 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC091153.1-201ENST00000466297 402 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC096751.1-202ENST00000502691 1067 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 MTND2P33-201ENST00000506452 1031 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 NDUFB4P2-201ENST00000509515 391 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC022483.1-201ENST00000514020 567 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 Y_RNA.672-201ENST00000516289 104 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RNU2-46P-201ENST00000517038 113 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 SCARNA20.6-201ENST00000517251 106 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 COX6CP3-201ENST00000580869 223 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 ZNF415P1-201ENST00000582279 1166 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 SNORD84-203ENST00000584275 78 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 NRBF2P1-201ENST00000587407 859 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC091805.2-201ENST00000603848 235 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC004908.2-201ENST00000609090 574 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC108747.1-201ENST00000609508 535 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 PLCE1P1-201ENST00000622094 305 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 AC084035.1-201ENST00000634543 607 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 MTND5P29-201ENST00000458676 1807 ntBASIC3.4□□□□□ -1.87
SLC44A1Q8WWI5 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 GNG5P1-201ENST00000255500 204 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RPL7P26-201ENST00000333817 754 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 U8.3-201ENST00000363321 132 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RNU5A-8P-201ENST00000364102 114 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-637P-201ENST00000384050 107 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RNU6-882P-201ENST00000391025 103 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RPL21P17-201ENST00000397467 475 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RNU2-43P-201ENST00000410306 190 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RN7SKP111-201ENST00000410349 271 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RNU2-8P-201ENST00000410727 190 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC069157.1-201ENST00000421749 137 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL589872.1-201ENST00000426602 288 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 CYCSP4-201ENST00000429682 331 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 OR4K11P-201ENST00000431829 904 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 NEK4P1-201ENST00000433383 879 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC073614.1-201ENST00000438690 650 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC234775.1-201ENST00000454247 670 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 MTND1P12-201ENST00000455231 147 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 snoU13.24-201ENST00000458998 104 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 VN1R17P-201ENST00000472048 1090 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 MTND1P3-201ENST00000484956 952 ntBASIC3.39□□□□□ -1.87
SLC44A1Q8WWI5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms