Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 TPT1P12-201ENST00000448968 492 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 MTND1P11-201ENST00000456661 876 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC105137.1-201ENST00000484355 562 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 RN7SL691P-201ENST00000494487 301 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 RPL29P14-201ENST00000495837 428 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 RPL31P61-201ENST00000496160 376 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC114786.4-201ENST00000508771 728 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 SNORA70.14-201ENST00000516205 110 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 OR5B19P-201ENST00000531766 928 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC018630.1-201ENST00000541376 925 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 C8orf59P2-201ENST00000603441 271 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 MIR378J-201ENST00000611988 109 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC023043.4-201ENST00000612081 449 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 TUG1_2.1-201ENST00000614234 87 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 AC004972.1-201ENST00000623934 2209 ntBASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.25□□□□□ -1.73
CCHCR1Q8TD31 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC073343.1-201ENST00000328239 651 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RPL32P3-201ENST00000359025 275 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 Y_RNA.72-201ENST00000362894 103 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 Y_RNA.86-201ENST00000363020 111 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RNU6-1009P-201ENST00000390996 107 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 MIR1251-201ENST00000408552 70 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC099677.1-201ENST00000420575 175 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AL513185.2-201ENST00000425543 193 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AL162389.1-201ENST00000449233 177 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC073415.1-201ENST00000449240 153 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RNA5SP246-201ENST00000458909 119 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 SNORD97-201ENST00000459187 142 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC006512.1-201ENST00000468816 291 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC007537.2-201ENST00000472093 511 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RPS27AP1-201ENST00000475545 471 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RPL38P4-201ENST00000502376 214 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC116562.3-201ENST00000506136 177 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 Vault.1-201ENST00000516474 102 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RNU7-143P-201ENST00000516781 65 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC068587.5-201ENST00000528506 175 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC123904.3-201ENST00000547218 814 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AL138976.2-201ENST00000563989 694 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 MIR4775-201ENST00000581168 75 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 MIR3138-201ENST00000585238 82 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC018638.8-201ENST00000588755 281 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AL117336.2-201ENST00000602435 335 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 AP001486.3-201ENST00000615334 372 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 MIR6758-201ENST00000620653 63 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 IPO8P1-201ENST00000455509 3109 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 DDX10P1-201ENST00000448545 1933 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 RIOK3P1-201ENST00000418778 1528 ntBASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CCHCR1Q8TD31 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 RNU6-960P-201ENST00000364056 120 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 RNU6-694P-201ENST00000364071 147 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 RN7SKP159-201ENST00000410657 292 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 UBE2FP1-201ENST00000416536 447 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 SRIP2-201ENST00000428470 166 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 RPL36AP6-201ENST00000435770 321 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 NUTF2P3-201ENST00000448540 384 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 RN7SL93P-201ENST00000463035 293 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 MRPS17P3-201ENST00000465453 385 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 AC010618.1-201ENST00000469924 477 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 AC026979.1-201ENST00000492525 396 ntBASIC4.23□□□□□ -1.73
CCHCR1Q8TD31 AC093278.1-201ENST00000494700 600 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms