Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AL135752.1-201ENST00000479477 471 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU4-60P-201ENST00000517239 135 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 SUB1P1-201ENST00000524415 382 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 CYCSP26-201ENST00000534107 320 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 RNU6-6P-201ENST00000606623 107 ntBASIC1.07□□□□□ -2.24
ALMS1Q8TCU4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 OR1L1-202ENST00000373686 1083 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 MTCYBP45-201ENST00000435243 565 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC090774.1-201ENST00000435925 246 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AL513321.1-201ENST00000441175 761 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 NF1P3-201ENST00000457709 450 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 HMGN1P7-201ENST00000491722 313 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC021146.8-201ENST00000507455 733 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC025768.1-201ENST00000510057 267 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 MIR502-201ENST00000606349 86 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AL030996.1-201ENST00000411430 235 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AP001804.3-201ENST00000525146 880 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC092954.1-201ENST00000609121 445 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 RNU4-52P-201ENST00000384209 138 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 MTCO3P35-201ENST00000485582 781 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC079203.1-201ENST00000487972 404 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 HMGB1P47-201ENST00000511281 589 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC091895.1-201ENST00000624494 256 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 NUP58P1-201ENST00000502546 1738 ntBASIC1.06□□□□□ -2.24
ALMS1Q8TCU4 AC006026.1-201ENST00000444025 1803 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 DDX10P1-201ENST00000448545 1933 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 RNU1-22P-201ENST00000363334 158 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 RN7SKP51-201ENST00000410781 304 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AP000907.2-201ENST00000530827 353 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 U73479.1-201ENST00000618062 168 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 RNU1-52P-201ENST00000384190 164 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 RNU6-997P-201ENST00000384725 107 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 SNORD23.1-201ENST00000408212 104 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AC004223.1-201ENST00000479840 271 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 FABP5P6-201ENST00000510588 409 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AC068944.2-201ENST00000610373 403 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 BX510359.4-201ENST00000423750 193 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 RNA5SP476-201ENST00000516613 103 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 AC245036.5-201ENST00000596330 847 ntBASIC1.05□□□□□ -2.24
ALMS1Q8TCU4 CD24P4-201ENST00000382840 243 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 SNORA40.6-201ENST00000391153 128 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MTCYBP18-201ENST00000501056 747 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC010627.1-201ENST00000503819 1294 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC021146.7-201ENST00000509604 775 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC024614.2-201ENST00000577584 372 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC124283.4-201ENST00000581815 456 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MIR3660-201ENST00000584845 100 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AL136363.1-201ENST00000605349 337 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MIR17-201ENST00000385012 84 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 RNU2-40P-201ENST00000410833 196 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 RPL31P63-201ENST00000422565 375 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 COX6CP12-201ENST00000446748 202 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC105252.1-201ENST00000503089 286 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC090616.5-202ENST00000582111 297 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 DEFB109C-201ENST00000382575 264 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 DEFB109B-201ENST00000382656 264 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 MIR153-1-201ENST00000384914 90 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 TPT1P14-201ENST00000448018 505 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AL035407.2-201ENST00000454090 378 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 PMCHL2-203ENST00000457791 237 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 ICE2P2-201ENST00000483823 2787 ntBASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.04□□□□□ -2.24
ALMS1Q8TCU4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms