Protein–RNA interactions for Protein: Q8N4P3

HDDC3, Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1, humanhuman

Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3Q8N4P3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC138915.1-201ENST00000565427 1685 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC092447.10-201ENST00000620607 1652 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 SNORD116.1-201ENST00000365628 92 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 RNU6-1176P-201ENST00000390955 107 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 RNU6-193P-201ENST00000410977 107 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 RNA5SP508-201ENST00000411327 119 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AL513477.1-202ENST00000417061 214 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 MTCYBP38-201ENST00000417160 1123 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 OR10R1P-201ENST00000441524 1141 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 PIGFP3-201ENST00000441918 722 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 UBBP3-201ENST00000445497 241 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC117440.1-201ENST00000474107 571 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 LARP1BP2-201ENST00000486594 519 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 SCGB1D5P-201ENST00000515134 247 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC005951.2-201ENST00000576282 495 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC002545.1-201ENST00000592511 181 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AL357094.1-201ENST00000603845 844 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AL160237.3-201ENST00000604114 1013 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AC019226.1-201ENST00000625666 515 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 AL138713.1-201ENST00000624026 2130 ntBASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.02□□□□□ -1.93
HDDC3Q8N4P3 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 MIR148B-201ENST00000362252 99 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC006960.1-201ENST00000419980 153 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 RPL7P37-201ENST00000425095 738 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AL035407.1-201ENST00000429211 571 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AL139132.1-201ENST00000431587 344 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 USP9YP10-201ENST00000454868 628 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 RNU7-23P-201ENST00000459465 62 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 RPS29P26-201ENST00000477483 171 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 RNU1-143P-201ENST00000516296 146 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC107016.2-201ENST00000547968 190 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 TRAV28-201ENST00000557548 323 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 NRBF2P5-201ENST00000603087 788 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AL157392.4-201ENST00000609756 345 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 U1.23-201ENST00000610293 146 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 RNU1-68P-201ENST00000615382 146 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 UCA1.1-201ENST00000620952 75 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 U1.39-201ENST00000621562 146 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 AC022336.2-201ENST00000568966 2538 ntBASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
HDDC3Q8N4P3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3□□□□□ -1.93
HDDC3Q8N4P3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 RNU4-82P-201ENST00000362443 140 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 SNORD56.5-201ENST00000364281 72 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3□□□□□ -1.93
HDDC3Q8N4P3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
HDDC3Q8N4P3 RNU1-39P-201ENST00000383897 165 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 RNU6-432P-201ENST00000384196 109 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 MTND1P21-201ENST00000412991 285 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 AL513175.2-201ENST00000422071 443 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 RPL35AP22-201ENST00000436855 335 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AL049734.2-201ENST00000441066 616 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 RPS12P18-201ENST00000442381 270 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AC009296.1-201ENST00000443146 155 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 EEF1E1P1-201ENST00000446998 430 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 ATG12P2-201ENST00000456830 416 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AC087588.1-201ENST00000462203 316 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3□□□□□ -1.93
HDDC3Q8N4P3 RN7SL20P-201ENST00000488827 297 ntBASIC3□□□□□ -1.93
HDDC3Q8N4P3 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms