Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC008121.2-201ENST00000614647 523 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AL353743.1-202ENST00000431724 1695 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC092104.1-201ENST00000497346 1441 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 TEX21P-201ENST00000447107 1476 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 AC066616.2-201ENST00000559334 1481 ntBASIC3.86□□□□□ -1.79
HERC6Q8IVU3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AF117829.1-206ENST00000621883 3802 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 MIR1289-1-201ENST00000408836 144 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 RPL21P24-201ENST00000413752 448 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 USP12PX-201ENST00000432383 1057 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 RABEPKP1-201ENST00000440529 1026 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 HMGN2P16-201ENST00000456802 261 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 U3.44-201ENST00000458938 192 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC093663.1-201ENST00000497190 394 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC068305.1-201ENST00000497406 726 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 NDUFB4P2-201ENST00000509515 391 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC011979.2-201ENST00000527568 352 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 EIF4BP1-201ENST00000554881 351 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 RSL24D1P11-201ENST00000591045 491 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AL606834.2-201ENST00000602954 668 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC064872.1-201ENST00000604823 1072 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AC013476.2-201ENST00000614456 459 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 FRG1KP-201ENST00000623592 341 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HERC6Q8IVU3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.85□□□□□ -1.79
HERC6Q8IVU3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 RNA5SP374-201ENST00000362939 125 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AL590383.1-201ENST00000428602 75 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC073614.1-201ENST00000438690 650 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 MTCO3P45-201ENST00000443036 613 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 MTCO1P19-201ENST00000443487 500 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 USP9YP29-201ENST00000445112 563 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AL671855.1-201ENST00000446875 1203 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 HMGN2P7-201ENST00000456186 273 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 RPS23P3-201ENST00000470993 430 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 TRBV12-2-201ENST00000489763 344 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 RN7SL504P-201ENST00000494496 287 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC091435.1-201ENST00000505442 584 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 CBX3P3-201ENST00000508108 532 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 NDUFB4P9-201ENST00000511646 388 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 RNU6-390P-201ENST00000516259 103 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 SNORA31.22-201ENST00000517204 135 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 MIR5680-201ENST00000577577 84 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 NRBF2P1-201ENST00000587407 859 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 DUXAP4-201ENST00000603046 613 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC109347.2-201ENST00000610220 349 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC010678.1-201ENST00000614118 713 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 uc_338.12-201ENST00000616344 181 ntBASIC3.84□□□□□ -1.79
HERC6Q8IVU3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.84□□□□□ -1.79
HERC6Q8IVU3 U7.8-201ENST00000619968 63 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms