Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC073346.2-201ENST00000624724 2058 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 SNORA36C-201ENST00000384289 132 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 RNU6-1207P-201ENST00000384343 107 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 MIR514A1-201ENST00000385133 98 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 MIR325-201ENST00000385260 98 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 USP9YP20-201ENST00000419224 558 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC018630.2-202ENST00000422992 927 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AL953862.1-201ENST00000423016 168 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 NDUFB4P7-201ENST00000423198 363 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC009237.8-201ENST00000445492 379 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AL031313.1-201ENST00000448435 256 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 RPL21P134-201ENST00000453468 483 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 RPS29P26-201ENST00000477483 171 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 HMGB1P36-201ENST00000487709 576 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC109445.1-201ENST00000512356 383 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC010374.2-201ENST00000512933 535 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 RNU6-928P-201ENST00000516876 104 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 ACTR3BP3-201ENST00000565577 979 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC090616.3-201ENST00000582184 217 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AL353997.4-201ENST00000586196 166 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC004987.4-201ENST00000603383 338 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC068313.1-201ENST00000604028 1008 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC006270.3-201ENST00000605967 1036 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AL157392.4-201ENST00000609756 345 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC103798.2-201ENST00000624292 632 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 AC099654.9-201ENST00000637055 678 ntBASIC2.59□□□□□ -1.99
NUDCD3Q8IVD9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.59□□□□□ -2
NUDCD3Q8IVD9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
NUDCD3Q8IVD9 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC010680.1-201ENST00000590024 3590 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 ZNF519P1-201ENST00000449011 1626 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AL161781.1-201ENST00000354277 403 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RNU6-97P-201ENST00000363387 104 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RNU6-359P-201ENST00000365466 108 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 SNORA18.3-201ENST00000384122 132 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 Y_RNA.465-201ENST00000384293 102 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RNU2-25P-201ENST00000411041 191 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AL354692.1-201ENST00000423044 315 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 ZYG11AP1-201ENST00000430329 837 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC011816.1-201ENST00000441346 546 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 MEMO1P3-201ENST00000459811 302 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AL135752.1-201ENST00000479477 471 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC116353.3-201ENST00000511215 249 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RNA5SP341-201ENST00000516261 117 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RNU6-1256P-201ENST00000516539 103 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 SNORA70.24-201ENST00000517233 118 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AP003497.1-201ENST00000528472 562 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 TMF1P1-201ENST00000576058 373 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC091057.3-201ENST00000602684 733 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC079089.3-201ENST00000603094 673 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AL603758.1-201ENST00000618654 241 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC068880.5-201ENST00000624331 290 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 OR5H6-203ENST00000642105 978 ntBASIC2.58□□□□□ -2
NUDCD3Q8IVD9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NUDCD3Q8IVD9 RNU6-289P-201ENST00000364093 107 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RNU6-270P-201ENST00000364131 105 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RNU4-68P-201ENST00000364314 141 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RNU1-112P-201ENST00000364401 164 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RNU6-1078P-201ENST00000364522 103 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AL592148.1-201ENST00000413568 445 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RPL35AP12-201ENST00000425362 338 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AL356867.1-201ENST00000429623 299 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 AC092427.1-202ENST00000430569 476 ntBASIC2.57□□□□□ -2
NUDCD3Q8IVD9 RPS25P9-201ENST00000435591 252 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms