Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VPS13CQ709C8 AC123912.5-201ENST00000605470 343 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 AL109933.3-201ENST00000619095 188 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.96□□□□□ -2.26
VPS13CQ709C8 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
VPS13CQ709C8 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC0.96□□□□□ -2.26
VPS13CQ709C8 SNORA18.2-201ENST00000383865 132 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 RNU1-52P-201ENST00000384190 164 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 TXNP7-201ENST00000406296 293 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 RPL30P6-201ENST00000475925 342 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
VPS13CQ709C8 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC0.96□□□□□ -2.26
VPS13CQ709C8 AC121758.2-201ENST00000553271 193 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 MIR6715B-201ENST00000637172 77 ntBASIC0.96□□□□□ -2.26
VPS13CQ709C8 AP000560.1-201ENST00000624150 1937 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS13CQ709C8 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC093801.2-201ENST00000503966 1050 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC110792.2-201ENST00000510278 224 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AP005435.4-201ENST00000529514 284 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC073413.2-201ENST00000604332 360 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC011330.2-201ENST00000621680 635 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 MIR338-201ENST00000636369 67 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
VPS13CQ709C8 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC107032.1-201ENST00000485945 480 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 MIR7974-201ENST00000615835 79 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC021755.4-201ENST00000616620 456 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AL138955.1-201ENST00000622881 1040 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 DPPA2P1-201ENST00000428060 556 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 AC139103.1-201ENST00000534696 1030 ntBASIC0.95□□□□□ -2.26
VPS13CQ709C8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
VPS13CQ709C8 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
VPS13CQ709C8 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 MIR1197-201ENST00000408818 88 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 RPL23AP35-201ENST00000451906 501 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 AC007229.1-201ENST00000590455 412 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 AL137072.1-201ENST00000603444 466 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
VPS13CQ709C8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
VPS13CQ709C8 RNU6-35P-201ENST00000384530 107 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 RWDD4P2-201ENST00000426392 563 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 RWDD4P1-201ENST00000488019 565 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 SUMO2P4-201ENST00000504193 276 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 GOLGA5P1-201ENST00000507317 980 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS13CQ709C8 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 HAUS1P1-201ENST00000505275 832 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 AL512605.2-201ENST00000592972 256 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.94□□□□□ -2.26
VPS13CQ709C8 AC116618.1-201ENST00000634617 774 ntBASIC0.94□□□□□ -2.26
VPS13CQ709C8 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
VPS13CQ709C8 RPL23AP41-201ENST00000484754 458 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 AC113155.1-201ENST00000511141 769 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 AC093752.1-206ENST00000511823 336 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 AC097655.1-201ENST00000635075 318 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 AL356118.1-201ENST00000635272 1078 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
VPS13CQ709C8 TATDN1P1-201ENST00000414123 891 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
VPS13CQ709C8 AC009965.2-201ENST00000425328 970 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 Z85994.2-201ENST00000434327 452 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 TRAV31-201ENST00000502780 342 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 EEF1B2P4-201ENST00000551398 348 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 MIR4446-201ENST00000578505 67 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 RNU6-115P-201ENST00000364310 107 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 IFNA20P-201ENST00000436840 528 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 HMGN2P20-201ENST00000437531 273 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 AL139109.1-201ENST00000455491 297 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC0.93□□□□□ -2.26
VPS13CQ709C8 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC0.93□□□□□ -2.26
VPS13CQ709C8 C1GALT1P2-201ENST00000510813 1104 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC0.93□□□□□ -2.26
VPS13CQ709C8 OR4V1P-201ENST00000525394 1140 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 uc_338.12-201ENST00000616344 181 ntBASIC0.93□□□□□ -2.26
VPS13CQ709C8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
VPS13CQ709C8 AL136164.4-201ENST00000625013 2135 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
VPS13CQ709C8 VTRNA1-1-201ENST00000363120 99 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
VPS13CQ709C8 RNA5SP127-201ENST00000411051 133 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 HMGB1P49-201ENST00000418882 569 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 AC013470.3-201ENST00000420252 1194 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 FO393415.2-201ENST00000480085 343 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC0.92□□□□□ -2.26
VPS13CQ709C8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS13CQ709C8 AC018754.1-201ENST00000607486 925 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 AC121761.2-201ENST00000617300 689 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.92□□□□□ -2.26
VPS13CQ709C8 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.92□□□□□ -2.26
VPS13CQ709C8 OR6K5P-201ENST00000447050 945 ntBASIC0.92□□□□□ -2.26
VPS13CQ709C8 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms