Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SNORA70.16-201ENST00000516390 95 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 RNU6-714P-201ENST00000516963 103 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.5□□□□□ -2.01
RFX4Q33E94 OR5BN1P-201ENST00000532955 829 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 AC123904.3-201ENST00000547218 814 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 AC128657.1-201ENST00000549459 145 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 MTND4P33-201ENST00000556706 766 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 AC090615.1-201ENST00000577519 154 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 MIR4446-201ENST00000578505 67 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 RPL23AP78-201ENST00000599928 470 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 BBIP1P1-201ENST00000602999 279 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 AC096577.2-201ENST00000611455 153 ntBASIC2.5□□□□□ -2.01
RFX4Q33E94 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.5□□□□□ -2.01
RFX4Q33E94 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.5□□□□□ -2.01
RFX4Q33E94 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
RFX4Q33E94 AC073346.2-201ENST00000624724 2058 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX4Q33E94 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFX4Q33E94 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
RFX4Q33E94 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX4Q33E94 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
RFX4Q33E94 RNU6-289P-201ENST00000364093 107 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 MIR493-201ENST00000385254 89 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFX4Q33E94 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX4Q33E94 TRBV24OR9-2-201ENST00000416632 435 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 MTND2P9-201ENST00000422293 931 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 TXNL1P1-201ENST00000429528 554 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX4Q33E94 LSM1P1-201ENST00000438629 273 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX4Q33E94 RPL26P6-201ENST00000440913 438 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 CR769776.1-201ENST00000441254 787 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.49□□□□□ -2.01
RFX4Q33E94 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX4Q33E94 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX4Q33E94 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX4Q33E94 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX4Q33E94 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.49□□□□□ -2.01
RFX4Q33E94 RNA5SP341-201ENST00000516261 117 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 RNU6-528P-201ENST00000516926 100 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
RFX4Q33E94 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX4Q33E94 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.49□□□□□ -2.01
RFX4Q33E94 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.49□□□□□ -2.01
RFX4Q33E94 AL158042.1-201ENST00000605338 460 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AC107952.2-201ENST00000606048 486 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 TUG1_1.1-201ENST00000610654 145 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AC006213.4-201ENST00000616184 634 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 CRYM-AS1-204ENST00000637983 556 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AC005539.1-201ENST00000443768 1479 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
RFX4Q33E94 DDX43P2-201ENST00000604753 1354 ntBASIC2.49□□□□□ -2.01
RFX4Q33E94 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RFX4Q33E94 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RFX4Q33E94 RNU6-173P-201ENST00000364215 104 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 RNU6-1180P-201ENST00000364935 107 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 RNU6-157P-201ENST00000383957 107 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 PIGPP2-201ENST00000411569 458 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX4Q33E94 AL513477.1-202ENST00000417061 214 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX4Q33E94 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX4Q33E94 AL117351.1-201ENST00000438864 766 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX4Q33E94 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.48□□□□□ -2.01
RFX4Q33E94 RPS27P27-201ENST00000498779 255 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.48□□□□□ -2.01
RFX4Q33E94 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 RNU6-311P-201ENST00000516224 102 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 SNORA31.22-201ENST00000517204 135 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX4Q33E94 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX4Q33E94 AP003497.1-201ENST00000528472 562 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.48□□□□□ -2.01
RFX4Q33E94 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
RFX4Q33E94 MIR5195-201ENST00000583555 115 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AL353997.4-201ENST00000586196 166 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.48□□□□□ -2.01
RFX4Q33E94 AC008739.2-201ENST00000597006 317 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.48□□□□□ -2.01
RFX4Q33E94 AC024153.1-201ENST00000603103 365 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 RPL12P50-201ENST00000603116 116 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC013444.2-201ENST00000603317 787 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC012468.1-201ENST00000604888 430 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC112220.3-201ENST00000605502 502 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC097478.2-201ENST00000610572 514 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AL139418.1-201ENST00000613613 177 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AL450472.3-201ENST00000615578 367 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 SNHG22-203ENST00000617833 660 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 AC002550.2-201ENST00000621246 394 ntBASIC2.48□□□□□ -2.01
RFX4Q33E94 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.48□□□□□ -2.01
RFX4Q33E94 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.48□□□□□ -2.01
RFX4Q33E94 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RFX4Q33E94 ZNF271P-202ENST00000465539 1970 ntBASIC2.47□□□□□ -2.01
RFX4Q33E94 ZNF876P-202ENST00000398732 1485 ntBASIC2.47□□□□□ -2.01
RFX4Q33E94 AC026241.1-201ENST00000517873 2142 ntBASIC2.47□□□□□ -2.01
RFX4Q33E94 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
RFX4Q33E94 TMEM167AP1-201ENST00000423409 219 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms