Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC006927.3-201ENST00000638789 384 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.04□□□□□ -1.92
SCN1BQ07699 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.04□□□□□ -1.92
SCN1BQ07699 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SCN1BQ07699 AC008669.1-201ENST00000565823 2178 ntBASIC3.04□□□□□ -1.92
SCN1BQ07699 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.04□□□□□ -1.92
SCN1BQ07699 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.04□□□□□ -1.92
SCN1BQ07699 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SCN1BQ07699 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCN1BQ07699 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SCN1BQ07699 TAS2R15P-201ENST00000390674 928 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 NDUFS5P1-201ENST00000405668 289 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 RN7SKP58-201ENST00000411010 305 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 ELOCP17-201ENST00000414751 326 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.03□□□□□ -1.92
SCN1BQ07699 UBE2D3P1-201ENST00000436669 444 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.03□□□□□ -1.92
SCN1BQ07699 CYCSP32-201ENST00000440548 321 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.03□□□□□ -1.92
SCN1BQ07699 WASF1P1-201ENST00000447560 1131 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AC087588.1-201ENST00000462203 316 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AL133162.1-201ENST00000463228 453 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.03□□□□□ -1.92
SCN1BQ07699 AC004263.1-201ENST00000479327 332 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 RPS29P20-201ENST00000489592 171 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.03□□□□□ -1.92
SCN1BQ07699 RNA5SP385-201ENST00000515947 110 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 RNA5SP471-201ENST00000516971 106 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 RANP9-201ENST00000519957 271 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.03□□□□□ -1.92
SCN1BQ07699 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.03□□□□□ -1.92
SCN1BQ07699 LRRC34P1-201ENST00000542742 915 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.03□□□□□ -1.92
SCN1BQ07699 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.03□□□□□ -1.92
SCN1BQ07699 ZNF519P3-201ENST00000557158 1032 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.03□□□□□ -1.92
SCN1BQ07699 AC010653.1-201ENST00000571108 881 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 MIR3146-201ENST00000580367 79 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AC020895.1-201ENST00000595362 272 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 KC877982.1-201ENST00000602313 470 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 AC140725.3-201ENST00000616193 880 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.03□□□□□ -1.92
SCN1BQ07699 AC099654.7-201ENST00000635788 2127 ntBASIC3.03□□□□□ -1.92
SCN1BQ07699 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SCN1BQ07699 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN1BQ07699 PABPC1P9-201ENST00000426076 1612 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SCN1BQ07699 RNU6-1167P-201ENST00000363227 94 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 RNU6-1284P-201ENST00000363701 100 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 RNY3P13-201ENST00000365542 102 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 RNU6-533P-201ENST00000384144 107 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 MTCYBP36-201ENST00000404146 440 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 RN7SKP263-201ENST00000411194 309 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.02□□□□□ -1.93
SCN1BQ07699 BMS1P22-201ENST00000414726 313 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AL353777.1-201ENST00000425552 326 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 SAR1AP4-201ENST00000429225 591 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 GTF2IP20-201ENST00000431663 360 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN1BQ07699 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN1BQ07699 NUTF2P7-201ENST00000453086 375 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 RNU7-125P-201ENST00000458760 62 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 RN7SL601P-201ENST00000471221 293 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC114786.4-201ENST00000508771 728 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN1BQ07699 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN1BQ07699 Y_RNA.717-201ENST00000517106 92 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC022616.6-201ENST00000520479 119 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN1BQ07699 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN1BQ07699 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SCN1BQ07699 AC008015.1-201ENST00000555505 465 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC136624.4-201ENST00000573044 370 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC090616.2-202ENST00000584248 222 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC008277.2-201ENST00000605196 797 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.02□□□□□ -1.93
SCN1BQ07699 AC068724.3-201ENST00000625906 87 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AP003399.1-201ENST00000637534 361 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC010149.2-201ENST00000637608 315 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 AC119674.1-207ENST00000641355 633 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 MTND5P19-201ENST00000424872 1794 ntBASIC3.02□□□□□ -1.93
SCN1BQ07699 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.02□□□□□ -1.93
SCN1BQ07699 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCN1BQ07699 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.01□□□□□ -1.93
SCN1BQ07699 U3.6-201ENST00000363622 211 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 RNU5F-7P-201ENST00000363696 115 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SCN1BQ07699 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AL139397.2-201ENST00000404529 772 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 RAB28P1-201ENST00000411517 641 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 MTND5P25-201ENST00000430499 799 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 OR2B8P-201ENST00000432841 938 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.01□□□□□ -1.93
SCN1BQ07699 AC091390.1-201ENST00000433904 331 ntBASIC3.01□□□□□ -1.93
SCN1BQ07699 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.01□□□□□ -1.93
SCN1BQ07699 MTND1P28-201ENST00000435623 950 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms