Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AC025768.1-201ENST00000510057 267 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC1.17□□□□□ -2.22
TFF3Q07654 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.17□□□□□ -2.22
TFF3Q07654 LLPHP1-201ENST00000603571 367 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 AC002487.1-201ENST00000604565 994 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 AC135178.6-201ENST00000605314 398 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 MIR7974-201ENST00000615835 79 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 AC073592.7-201ENST00000623659 507 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 AL133216.2-202ENST00000634512 349 ntBASIC1.17□□□□□ -2.22
TFF3Q07654 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TFF3Q07654 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TFF3Q07654 AC011477.1-204ENST00000623416 1325 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 RNU1-93P-201ENST00000364704 169 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 RPL31P52-201ENST00000407532 367 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.16□□□□□ -2.22
TFF3Q07654 AC096533.1-201ENST00000411645 353 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 AL627224.1-201ENST00000448334 444 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 AC104685.1-201ENST00000502445 371 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.16□□□□□ -2.22
TFF3Q07654 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.16□□□□□ -2.22
TFF3Q07654 AP003033.1-201ENST00000527244 415 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC1.16□□□□□ -2.22
TFF3Q07654 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.16□□□□□ -2.22
TFF3Q07654 AC008015.1-201ENST00000555505 465 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.16□□□□□ -2.22
TFF3Q07654 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.16□□□□□ -2.22
TFF3Q07654 OR4G1P-201ENST00000588632 938 ntBASIC1.16□□□□□ -2.22
TFF3Q07654 RNU6-1181P-201ENST00000384191 106 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AC068050.1-201ENST00000394891 380 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.15□□□□□ -2.23
TFF3Q07654 AC007098.1-201ENST00000420122 367 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AC093084.1-201ENST00000424233 687 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AC096632.1-201ENST00000427395 310 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.15□□□□□ -2.23
TFF3Q07654 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC1.15□□□□□ -2.23
TFF3Q07654 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.15□□□□□ -2.23
TFF3Q07654 AC096745.1-201ENST00000509945 370 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
TFF3Q07654 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.15□□□□□ -2.23
TFF3Q07654 AC080078.3-201ENST00000605407 463 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.15□□□□□ -2.23
TFF3Q07654 AC007620.3-201ENST00000608131 497 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AL110115.1-201ENST00000614396 364 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 uc_338.9-201ENST00000617424 182 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 STMN1P1-201ENST00000617809 440 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.15□□□□□ -2.23
TFF3Q07654 MIR3199-2-201ENST00000636243 86 ntBASIC1.15□□□□□ -2.23
TFF3Q07654 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.15□□□□□ -2.23
TFF3Q07654 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-1-201ENST00000383898 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-203P-201ENST00000384038 104 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-42P-201ENST00000384165 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-36P-201ENST00000384172 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-4P-201ENST00000384205 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-5P-201ENST00000384238 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-3P-201ENST00000384314 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-2-201ENST00000384627 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-9-201ENST00000384776 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-33P-201ENST00000384793 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 MIR17-201ENST00000385012 84 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 AL365400.1-201ENST00000431854 640 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.14□□□□□ -2.23
TFF3Q07654 AC090774.1-201ENST00000435925 246 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TFF3Q07654 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.14□□□□□ -2.23
TFF3Q07654 AC113155.1-201ENST00000511141 769 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 NPM1P52-201ENST00000518264 846 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.14□□□□□ -2.23
TFF3Q07654 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.14□□□□□ -2.23
TFF3Q07654 AC068714.1-201ENST00000559623 800 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 AP005136.1-201ENST00000579765 429 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.14□□□□□ -2.23
TFF3Q07654 RNU6-6P-201ENST00000606623 107 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 AC068831.7-201ENST00000616954 363 ntBASIC1.14□□□□□ -2.23
TFF3Q07654 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.14□□□□□ -2.23
TFF3Q07654 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.14□□□□□ -2.23
TFF3Q07654 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.14□□□□□ -2.23
TFF3Q07654 RPS12P24-201ENST00000412619 387 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 UBE2V1P13-201ENST00000436983 439 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 AL139109.1-201ENST00000455491 297 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 RPS29P29-201ENST00000456396 171 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 RPS3AP22-201ENST00000488297 769 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 MTCYBP35-201ENST00000503630 1137 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 AC020699.1-201ENST00000505161 445 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.13□□□□□ -2.23
TFF3Q07654 RNA5SP220-201ENST00000516298 104 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.13□□□□□ -2.23
TFF3Q07654 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TFF3Q07654 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
TFF3Q07654 AL078603.1-201ENST00000603824 313 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC1.13□□□□□ -2.23
TFF3Q07654 AC008121.3-201ENST00000618726 433 ntBASIC1.13□□□□□ -2.23
TFF3Q07654 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.12□□□□□ -2.23
TFF3Q07654 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TFF3Q07654 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TFF3Q07654 RNU6-600P-201ENST00000362524 99 ntBASIC1.12□□□□□ -2.23
TFF3Q07654 RNU2-71P-201ENST00000411395 189 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 142.8 ms