Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC139783.2-201ENST00000504847 1145 ntBASIC2.94□□□□□ -1.94
LMO4P61968 VWA8P1-201ENST00000510889 176 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RNU4ATAC6P-201ENST00000516592 126 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RNU6-579P-201ENST00000516879 102 ntBASIC2.94□□□□□ -1.94
LMO4P61968 SNORA31.20-201ENST00000517111 133 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC104986.1-201ENST00000517978 436 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.94□□□□□ -1.94
LMO4P61968 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 AL133457.1-201ENST00000564251 987 ntBASIC2.94□□□□□ -1.94
LMO4P61968 MIR3682-201ENST00000581338 84 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 SNORD84-203ENST00000584275 78 ntBASIC2.94□□□□□ -1.94
LMO4P61968 MAGOH2P-202ENST00000584384 429 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC008752.3-201ENST00000588113 712 ntBASIC2.94□□□□□ -1.94
LMO4P61968 TPMTP1-201ENST00000592307 737 ntBASIC2.94□□□□□ -1.94
LMO4P61968 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 AP001330.5-201ENST00000607176 411 ntBASIC2.94□□□□□ -1.94
LMO4P61968 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 AP003355.3-201ENST00000623465 114 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC048347.1-201ENST00000624621 427 ntBASIC2.94□□□□□ -1.94
LMO4P61968 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 AL732372.2-225ENST00000642124 456 ntBASIC2.94□□□□□ -1.94
LMO4P61968 AC027287.1-201ENST00000553115 1453 ntBASIC2.94□□□□□ -1.94
LMO4P61968 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.94□□□□□ -1.94
LMO4P61968 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LMO4P61968 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC2.94□□□□□ -1.94
LMO4P61968 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 ANKRD20A10P-201ENST00000457591 1515 ntBASIC2.93□□□□□ -1.94
LMO4P61968 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LMO4P61968 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 AC244517.1-201ENST00000606030 2086 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC092326.2-201ENST00000624772 1561 ntBASIC2.93□□□□□ -1.94
LMO4P61968 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 RNU6-629P-201ENST00000384061 103 ntBASIC2.93□□□□□ -1.94
LMO4P61968 RNU6-1103P-201ENST00000384150 107 ntBASIC2.93□□□□□ -1.94
LMO4P61968 Y_RNA.573-201ENST00000384763 105 ntBASIC2.93□□□□□ -1.94
LMO4P61968 SNORD17-201ENST00000390930 237 ntBASIC2.93□□□□□ -1.94
LMO4P61968 RNU2-15P-201ENST00000410692 191 ntBASIC2.93□□□□□ -1.94
LMO4P61968 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 AL589872.1-201ENST00000426602 288 ntBASIC2.93□□□□□ -1.94
LMO4P61968 MTND1P14-201ENST00000427400 950 ntBASIC2.93□□□□□ -1.94
LMO4P61968 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 NANOGP6-201ENST00000429190 847 ntBASIC2.93□□□□□ -1.94
LMO4P61968 RPL31P35-201ENST00000431058 377 ntBASIC2.93□□□□□ -1.94
LMO4P61968 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 ARPC3P1-201ENST00000437218 533 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.93□□□□□ -1.94
LMO4P61968 ARPC3P5-201ENST00000448802 534 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC007967.1-201ENST00000455422 1159 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC2.93□□□□□ -1.94
LMO4P61968 MTND1P11-201ENST00000456661 876 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC026410.2-201ENST00000460281 156 ntBASIC2.93□□□□□ -1.94
LMO4P61968 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 RPS29P25-201ENST00000481709 171 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AP001086.1-201ENST00000494882 321 ntBASIC2.93□□□□□ -1.94
LMO4P61968 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LMO4P61968 AC006390.1-201ENST00000508068 283 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC024589.1-201ENST00000512207 263 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC034159.1-201ENST00000513885 583 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 RNU6-27P-201ENST00000516146 107 ntBASIC2.93□□□□□ -1.94
LMO4P61968 SNORA70.24-201ENST00000517233 118 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 MTND1P35-201ENST00000526739 508 ntBASIC2.93□□□□□ -1.94
LMO4P61968 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC2.93□□□□□ -1.94
LMO4P61968 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 GLYCAM1-201ENST00000546596 285 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AL121603.1-201ENST00000553815 142 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AL512360.1-201ENST00000555346 234 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.93□□□□□ -1.94
LMO4P61968 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC2.93□□□□□ -1.94
LMO4P61968 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC2.93□□□□□ -1.94
LMO4P61968 MIR5195-201ENST00000583555 115 ntBASIC2.93□□□□□ -1.94
LMO4P61968 NRBF2P1-201ENST00000587407 859 ntBASIC2.93□□□□□ -1.94
LMO4P61968 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 AL391646.1-201ENST00000603860 190 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC007363.1-201ENST00000604736 620 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC055876.5-201ENST00000605667 259 ntBASIC2.93□□□□□ -1.94
LMO4P61968 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.93□□□□□ -1.94
LMO4P61968 AC006023.2-201ENST00000609916 167 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AL442067.2-201ENST00000614033 363 ntBASIC2.93□□□□□ -1.94
LMO4P61968 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.93□□□□□ -1.94
LMO4P61968 AC007742.2-201ENST00000618226 398 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms