Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.85□□□□□ -2.11
VBP1P61758 AL049838.1-201ENST00000563647 981 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AC034105.4-201ENST00000568304 277 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.85□□□□□ -2.11
VBP1P61758 MIR3200-201ENST00000580767 85 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AC008739.3-201ENST00000603262 127 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.85□□□□□ -2.11
VBP1P61758 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VBP1P61758 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.85□□□□□ -2.11
VBP1P61758 MTND5P1-201ENST00000445440 1375 ntBASIC1.85□□□□□ -2.11
VBP1P61758 AC025263.3-201ENST00000622965 1396 ntBASIC1.85□□□□□ -2.11
VBP1P61758 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
VBP1P61758 AC007785.2-201ENST00000598627 1916 ntBASIC1.84□□□□□ -2.11
VBP1P61758 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
VBP1P61758 RNU1-91P-201ENST00000364746 163 ntBASIC1.84□□□□□ -2.11
VBP1P61758 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VBP1P61758 RNA5SP489-201ENST00000410986 109 ntBASIC1.84□□□□□ -2.11
VBP1P61758 RPS3AP25-201ENST00000411660 793 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.84□□□□□ -2.11
VBP1P61758 RPS15AP5-201ENST00000436276 388 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.84□□□□□ -2.11
VBP1P61758 RPL23AP3-201ENST00000453844 468 ntBASIC1.84□□□□□ -2.11
VBP1P61758 snoU109.1-201ENST00000459339 135 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AC080013.2-201ENST00000460866 323 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AC096571.1-202ENST00000506634 735 ntBASIC1.84□□□□□ -2.11
VBP1P61758 SNORA31.23-201ENST00000517219 133 ntBASIC1.84□□□□□ -2.11
VBP1P61758 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.84□□□□□ -2.11
VBP1P61758 HMGB1P1-201ENST00000522557 636 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.84□□□□□ -2.11
VBP1P61758 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
VBP1P61758 HIGD1AP5-201ENST00000529959 259 ntBASIC1.84□□□□□ -2.11
VBP1P61758 MIR3158-1-201ENST00000583596 81 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.84□□□□□ -2.11
VBP1P61758 ELOCP29-201ENST00000588193 334 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AC080013.4-201ENST00000607624 649 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AC010678.1-201ENST00000614118 713 ntBASIC1.84□□□□□ -2.11
VBP1P61758 AL590099.1-201ENST00000615276 138 ntBASIC1.84□□□□□ -2.11
VBP1P61758 U4atac.1-201ENST00000618345 95 ntBASIC1.84□□□□□ -2.11
VBP1P61758 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VBP1P61758 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
VBP1P61758 ZNF702P-202ENST00000434269 1966 ntBASIC1.83□□□□□ -2.12
VBP1P61758 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.83□□□□□ -2.12
VBP1P61758 MIR134-201ENST00000385258 73 ntBASIC1.83□□□□□ -2.12
VBP1P61758 AL356432.1-201ENST00000405809 419 ntBASIC1.83□□□□□ -2.12
VBP1P61758 AL445685.2-201ENST00000422551 342 ntBASIC1.83□□□□□ -2.12
VBP1P61758 PTP4A1P7-201ENST00000423476 514 ntBASIC1.83□□□□□ -2.12
VBP1P61758 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.83□□□□□ -2.12
VBP1P61758 AC000041.1-201ENST00000439655 175 ntBASIC1.83□□□□□ -2.12
VBP1P61758 AC093155.1-201ENST00000440164 826 ntBASIC1.83□□□□□ -2.12
VBP1P61758 CBWD4P-201ENST00000445695 655 ntBASIC1.83□□□□□ -2.12
VBP1P61758 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC1.83□□□□□ -2.12
VBP1P61758 AC025181.1-201ENST00000477507 416 ntBASIC1.83□□□□□ -2.12
VBP1P61758 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 SETP12-201ENST00000514068 805 ntBASIC1.83□□□□□ -2.12
VBP1P61758 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.83□□□□□ -2.12
VBP1P61758 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VBP1P61758 HMGN1P28-201ENST00000521340 364 ntBASIC1.83□□□□□ -2.12
VBP1P61758 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 LINC00933-203ENST00000559812 219 ntBASIC1.83□□□□□ -2.12
VBP1P61758 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
VBP1P61758 MIR4697-201ENST00000582977 78 ntBASIC1.83□□□□□ -2.12
VBP1P61758 MIR4325-201ENST00000583049 90 ntBASIC1.83□□□□□ -2.12
VBP1P61758 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.83□□□□□ -2.12
VBP1P61758 OR4G11P-202ENST00000642116 1414 ntBASIC1.83□□□□□ -2.12
VBP1P61758 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VBP1P61758 HSPA8P4-201ENST00000511877 1920 ntBASIC1.82□□□□□ -2.12
VBP1P61758 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
VBP1P61758 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
VBP1P61758 RNU5A-1-201ENST00000362698 116 ntBASIC1.82□□□□□ -2.12
VBP1P61758 RNU6-1159P-201ENST00000362933 107 ntBASIC1.82□□□□□ -2.12
VBP1P61758 MIR34B-201ENST00000385076 84 ntBASIC1.82□□□□□ -2.12
VBP1P61758 RNU6-750P-201ENST00000390946 107 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AL121978.1-201ENST00000402778 359 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.82□□□□□ -2.12
VBP1P61758 AL512637.2-201ENST00000431287 1256 ntBASIC1.82□□□□□ -2.12
VBP1P61758 MTND2P21-201ENST00000436242 1042 ntBASIC1.82□□□□□ -2.12
VBP1P61758 RPL26P6-201ENST00000440913 438 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.82□□□□□ -2.12
VBP1P61758 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.82□□□□□ -2.12
VBP1P61758 MTCO3P2-201ENST00000457365 171 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.82□□□□□ -2.12
VBP1P61758 MRPS17P3-201ENST00000465453 385 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC092757.1-201ENST00000467293 467 ntBASIC1.82□□□□□ -2.12
VBP1P61758 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.82□□□□□ -2.12
VBP1P61758 MTCO2P9-201ENST00000503214 694 ntBASIC1.82□□□□□ -2.12
VBP1P61758 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VBP1P61758 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.82□□□□□ -2.12
VBP1P61758 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.82□□□□□ -2.12
VBP1P61758 AP005639.2-201ENST00000527592 928 ntBASIC1.82□□□□□ -2.12
VBP1P61758 OR5AL2P-201ENST00000532185 920 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC124947.2-202ENST00000552735 133 ntBASIC1.82□□□□□ -2.12
VBP1P61758 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.82□□□□□ -2.12
VBP1P61758 AC008121.1-201ENST00000603244 268 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms