Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 HIGD1AP13-201ENST00000509878 289 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 RNU6-1102P-201ENST00000516149 96 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC027309.2-201ENST00000520566 192 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC079600.2-201ENST00000550076 130 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 MIR4666A-201ENST00000580160 79 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 MIR3199-1-201ENST00000582434 88 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 MIR5007-201ENST00000583098 95 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 ZNF92P2-201ENST00000600543 1059 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC006539.2-201ENST00000601729 572 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC008121.1-201ENST00000603244 268 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AP000403.1-201ENST00000603349 851 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 FTX_3.1-201ENST00000610451 147 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 MIR7112-201ENST00000616126 65 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.59□□□□□ -2.15
HIST1H2BDP58876 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HIST1H2BDP58876 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.59□□□□□ -2.16
HIST1H2BDP58876 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 RNU6-1066P-201ENST00000363573 105 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 XGY1-201ENST00000381172 446 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 RNU6-140P-201ENST00000384566 108 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 U3.19-201ENST00000390893 196 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 SNORA48.3-201ENST00000391081 134 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 SNORA11B-201ENST00000408175 129 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 RN7SKP202-201ENST00000410439 330 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 ZNF863P-201ENST00000426746 417 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 MICF-203ENST00000432679 129 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AL512661.1-201ENST00000434586 1253 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 RPS29P22-201ENST00000472363 168 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AC025181.1-201ENST00000477507 416 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AC096725.1-201ENST00000514266 313 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 SNORA31.6-201ENST00000516241 130 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 RNU6-751P-201ENST00000516382 101 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AC022784.5-201ENST00000522241 437 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AP002906.1-201ENST00000603405 233 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AL589743.7-201ENST00000612637 233 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 AC131280.1-202ENST00000624067 4211 ntBASIC1.58□□□□□ -2.16
HIST1H2BDP58876 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
HIST1H2BDP58876 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 RNU6-525P-201ENST00000363685 104 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 RNA5SP125-201ENST00000364843 120 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 SUGT1P1-201ENST00000379514 476 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 RNU6-1083P-201ENST00000384022 107 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 RNU6-549P-201ENST00000384433 107 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 MIR218-1-201ENST00000384999 110 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC008850.1-201ENST00000427546 362 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 MTCYBP32-201ENST00000427945 1084 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC007919.1-201ENST00000429380 217 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AL118520.1-201ENST00000450770 291 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 RPL12P25-201ENST00000455592 494 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 PPP1R2P5-201ENST00000457256 603 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 RPL26P9-201ENST00000457466 433 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 HMGB3P17-201ENST00000504195 649 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC118465.1-201ENST00000513820 1271 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC026403.1-201ENST00000518938 295 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 HSPA8P13-201ENST00000523715 472 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 ZNF971P-201ENST00000562068 1249 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC024220.1-201ENST00000603675 484 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC136601.2-201ENST00000604356 474 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AL021997.1-201ENST00000605757 193 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC103810.6-201ENST00000606708 136 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC211433.2-201ENST00000608433 387 ntBASIC1.57□□□□□ -2.16
HIST1H2BDP58876 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms