Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 Y_RNA.578-201ENST00000390903 88 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AL512633.1-201ENST00000399931 655 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 RPS4XP8-201ENST00000402039 771 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN18P56856 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN18P56856 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN18P56856 MTND4P6-201ENST00000438297 472 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AL445687.1-201ENST00000439946 251 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AP1S2P1-201ENST00000457344 379 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 RPL31P50-201ENST00000471002 296 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AC138853.1-201ENST00000503549 823 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 SUMO2P6-201ENST00000505273 288 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AC113155.1-201ENST00000511141 769 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.39□□□□□ -2.03
CLDN18P56856 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.39□□□□□ -2.03
CLDN18P56856 AC096725.1-201ENST00000514266 313 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AC093677.1-201ENST00000514414 678 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 SNORA31.15-201ENST00000516771 132 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 SNORA31.18-201ENST00000517043 134 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AC025881.1-201ENST00000518851 512 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AP003168.1-201ENST00000530091 307 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AP000857.1-201ENST00000532151 543 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AC087897.1-201ENST00000550134 156 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN18P56856 AL355836.1-201ENST00000555951 870 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.39□□□□□ -2.03
CLDN18P56856 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN18P56856 AC120053.1-201ENST00000607706 736 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.39□□□□□ -2.03
CLDN18P56856 AC093838.1-201ENST00000613014 469 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 FO624990.1-201ENST00000636373 85 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 MIR4275-201ENST00000636486 87 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
CLDN18P56856 ASNSP3-201ENST00000451989 1306 ntBASIC2.39□□□□□ -2.03
CLDN18P56856 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CLDN18P56856 AL136360.1-201ENST00000503377 1900 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
CLDN18P56856 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLDN18P56856 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CLDN18P56856 SNORA63.3-201ENST00000362682 132 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 HMGB1P17-201ENST00000403495 628 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN18P56856 C1DP1-201ENST00000426049 402 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN18P56856 GTF2IP20-201ENST00000431663 360 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 Z80107.1-201ENST00000436830 412 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 PTGES3P1-201ENST00000439531 483 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 ARF4P4-201ENST00000439608 520 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 PIGFP3-201ENST00000441918 722 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AC017099.1-201ENST00000448261 1028 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN18P56856 AP000852.1-201ENST00000472460 573 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 HMGB1P28-201ENST00000507778 552 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN18P56856 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.38□□□□□ -2.03
CLDN18P56856 SLC2A13P1-201ENST00000531560 322 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLDN18P56856 AL133271.1-201ENST00000538229 291 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AC004486.1-201ENST00000546846 233 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.38□□□□□ -2.03
CLDN18P56856 AC087465.1-201ENST00000560574 245 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AC025281.1-201ENST00000567026 265 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 VN1R78P-201ENST00000597393 564 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AC024560.3-201ENST00000608482 349 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.38□□□□□ -2.03
CLDN18P56856 MIR7515-201ENST00000637837 67 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 AC022336.2-201ENST00000568966 2538 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CLDN18P56856 AC109315.1-201ENST00000584143 1347 ntBASIC2.38□□□□□ -2.03
CLDN18P56856 CCT4P2-201ENST00000233836 1548 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CLDN18P56856 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
CLDN18P56856 RNA5SP393-201ENST00000363423 117 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 RNU6-461P-201ENST00000364195 107 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLDN18P56856 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CLDN18P56856 AL139039.1-201ENST00000401900 692 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AL161449.1-201ENST00000414531 1199 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 MRPS36P1-201ENST00000421291 307 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.37□□□□□ -2.03
CLDN18P56856 AC098614.2-201ENST00000426040 255 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AC013262.1-201ENST00000426710 252 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN18P56856 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.37□□□□□ -2.03
CLDN18P56856 Z82210.1-201ENST00000440037 231 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 CBWD4P-201ENST00000445695 655 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN18P56856 AC108734.3-201ENST00000481241 1165 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AC105252.1-201ENST00000503089 286 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 CDC42P4-201ENST00000510507 563 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 RNU4-29P-201ENST00000515943 174 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 RNA5SP282-201ENST00000516355 108 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN18P56856 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.37□□□□□ -2.03
CLDN18P56856 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AC068313.1-201ENST00000604028 1008 ntBASIC2.37□□□□□ -2.03
CLDN18P56856 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms