Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH13P55290 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH13P55290 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH13P55290 AL672167.3-201ENST00000465951 960 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AL049874.1-201ENST00000489560 388 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH13P55290 AC010265.1-201ENST00000513509 211 ntBASIC3.25□□□□□ -1.89
CDH13P55290 NRON-201ENST00000517270 370 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AC068657.1-201ENST00000520807 306 ntBASIC3.25□□□□□ -1.89
CDH13P55290 OR5G4P-201ENST00000525251 760 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AP002748.2-201ENST00000528671 348 ntBASIC3.25□□□□□ -1.89
CDH13P55290 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH13P55290 AC123904.3-201ENST00000547218 814 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.25□□□□□ -1.89
CDH13P55290 AC124947.2-202ENST00000552735 133 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AC107294.3-201ENST00000609211 526 ntBASIC3.25□□□□□ -1.89
CDH13P55290 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH13P55290 uc_338.12-201ENST00000616344 181 ntBASIC3.25□□□□□ -1.89
CDH13P55290 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.25□□□□□ -1.89
CDH13P55290 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
CDH13P55290 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
CDH13P55290 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH13P55290 ELL2P3-201ENST00000457883 1602 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH13P55290 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH13P55290 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.25□□□□□ -1.89
CDH13P55290 OR4G2P-202ENST00000641004 1759 ntBASIC3.25□□□□□ -1.89
CDH13P55290 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.25□□□□□ -1.89
CDH13P55290 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDH13P55290 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH13P55290 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH13P55290 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CDH13P55290 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CDH13P55290 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CDH13P55290 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
CDH13P55290 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
CDH13P55290 RNU6-1284P-201ENST00000363701 100 ntBASIC3.24□□□□□ -1.89
CDH13P55290 RPS4XP3-201ENST00000398541 413 ntBASIC3.24□□□□□ -1.89
CDH13P55290 FCF1P10-201ENST00000407590 479 ntBASIC3.24□□□□□ -1.89
CDH13P55290 RN7SKP202-201ENST00000410439 330 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC006366.1-201ENST00000422002 759 ntBASIC3.24□□□□□ -1.89
CDH13P55290 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH13P55290 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH13P55290 AC093156.1-201ENST00000440382 670 ntBASIC3.24□□□□□ -1.89
CDH13P55290 RPL17P49-201ENST00000443728 411 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH13P55290 AC016696.1-201ENST00000446949 318 ntBASIC3.24□□□□□ -1.89
CDH13P55290 RBMY2UP-201ENST00000453474 324 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC012181.1-201ENST00000479895 423 ntBASIC3.24□□□□□ -1.89
CDH13P55290 RPL32P34-201ENST00000486380 400 ntBASIC3.24□□□□□ -1.89
CDH13P55290 FCF1P8-201ENST00000510322 597 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH13P55290 RNU6-64P-201ENST00000517119 105 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AP003467.2-201ENST00000520175 319 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.24□□□□□ -1.89
CDH13P55290 AL356057.1-201ENST00000533798 831 ntBASIC3.24□□□□□ -1.89
CDH13P55290 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH13P55290 AC093012.1-202ENST00000549403 582 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC037471.2-201ENST00000564941 598 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH13P55290 AC005951.2-201ENST00000576282 495 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC015917.1-201ENST00000579654 510 ntBASIC3.24□□□□□ -1.89
CDH13P55290 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH13P55290 MIR4293-201ENST00000584305 78 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH13P55290 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH13P55290 AP001981.2-201ENST00000603241 418 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC008277.2-201ENST00000605196 797 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC108747.1-201ENST00000609508 535 ntBASIC3.24□□□□□ -1.89
CDH13P55290 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.24□□□□□ -1.89
CDH13P55290 SNORA50A-202ENST00000629536 136 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AL034408.1-202ENST00000636088 415 ntBASIC3.24□□□□□ -1.89
CDH13P55290 AC092104.1-201ENST00000497346 1441 ntBASIC3.24□□□□□ -1.89
CDH13P55290 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.24□□□□□ -1.89
CDH13P55290 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.24□□□□□ -1.89
CDH13P55290 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
CDH13P55290 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
CDH13P55290 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CDH13P55290 FGF7P2-201ENST00000332473 296 ntBASIC3.23□□□□□ -1.89
CDH13P55290 RNU1-39P-201ENST00000383897 165 ntBASIC3.23□□□□□ -1.89
CDH13P55290 SNORD116-2-201ENST00000384274 95 ntBASIC3.23□□□□□ -1.89
CDH13P55290 SNORD116-6-201ENST00000384711 96 ntBASIC3.23□□□□□ -1.89
CDH13P55290 RNY3P10-201ENST00000384764 102 ntBASIC3.23□□□□□ -1.89
CDH13P55290 RNA5SP44-201ENST00000410446 133 ntBASIC3.23□□□□□ -1.89
CDH13P55290 RN7SKP140-201ENST00000411196 284 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL513331.1-201ENST00000411908 397 ntBASIC3.23□□□□□ -1.89
CDH13P55290 ELOCP17-201ENST00000414751 326 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 AL451054.2-201ENST00000420896 202 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH13P55290 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.23□□□□□ -1.89
CDH13P55290 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH13P55290 HSPD1P21-201ENST00000436541 245 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH13P55290 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.23□□□□□ -1.89
CDH13P55290 TAF9P1-201ENST00000445421 515 ntBASIC3.23□□□□□ -1.89
CDH13P55290 AL590664.1-201ENST00000448065 339 ntBASIC3.23□□□□□ -1.89
CDH13P55290 TAF9P2-201ENST00000454958 515 ntBASIC3.23□□□□□ -1.89
CDH13P55290 MTND1P12-201ENST00000455231 147 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms