Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH6P55285 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH6P55285 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDH6P55285 DEFA7P-201ENST00000382676 285 ntBASIC2.6□□□□□ -1.99
CDH6P55285 MIR325-201ENST00000385260 98 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AL162578.1-201ENST00000406202 378 ntBASIC2.6□□□□□ -1.99
CDH6P55285 Z85995.1-201ENST00000415547 335 ntBASIC2.6□□□□□ -1.99
CDH6P55285 PPP1R11P2-201ENST00000423543 382 ntBASIC2.6□□□□□ -1.99
CDH6P55285 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH6P55285 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH6P55285 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH6P55285 AL714022.1-201ENST00000439897 151 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC009961.3-201ENST00000449832 765 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.6□□□□□ -1.99
CDH6P55285 AP000705.1-201ENST00000454567 350 ntBASIC2.6□□□□□ -1.99
CDH6P55285 RNU7-23P-201ENST00000459465 62 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC116337.2-201ENST00000477662 156 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AL135752.1-201ENST00000479477 471 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC108734.3-201ENST00000481241 1165 ntBASIC2.6□□□□□ -1.99
CDH6P55285 RN7SL432P-201ENST00000484057 298 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AL049874.1-201ENST00000489560 388 ntBASIC2.6□□□□□ -1.99
CDH6P55285 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
CDH6P55285 AC016550.1-201ENST00000505348 785 ntBASIC2.6□□□□□ -1.99
CDH6P55285 TTC39CP1-201ENST00000512513 755 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC093677.1-201ENST00000514414 678 ntBASIC2.6□□□□□ -1.99
CDH6P55285 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
CDH6P55285 RNU6-467P-201ENST00000517027 110 ntBASIC2.6□□□□□ -1.99
CDH6P55285 HMGB1P41-201ENST00000520234 440 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH6P55285 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH6P55285 AC090888.1-201ENST00000561335 1141 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.6□□□□□ -1.99
CDH6P55285 MIR3670-2-201ENST00000582974 65 ntBASIC2.6□□□□□ -1.99
CDH6P55285 MIR3670-1-201ENST00000584160 65 ntBASIC2.6□□□□□ -1.99
CDH6P55285 MIR3670-3-201ENST00000584855 65 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH6P55285 AC024560.3-201ENST00000608482 349 ntBASIC2.6□□□□□ -1.99
CDH6P55285 MIR3670-4-201ENST00000612260 65 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC008443.7-201ENST00000622195 246 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AP003485.2-201ENST00000623636 610 ntBASIC2.6□□□□□ -1.99
CDH6P55285 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.6□□□□□ -1.99
CDH6P55285 FO624990.1-201ENST00000636373 85 ntBASIC2.6□□□□□ -1.99
CDH6P55285 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
CDH6P55285 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CDH6P55285 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH6P55285 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH6P55285 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDH6P55285 SNORA36C-201ENST00000384289 132 ntBASIC2.59□□□□□ -1.99
CDH6P55285 MIR27B-201ENST00000385129 97 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AL122016.1-201ENST00000403365 367 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH6P55285 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH6P55285 MTCO2P17-201ENST00000424336 677 ntBASIC2.59□□□□□ -1.99
CDH6P55285 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH6P55285 AP000949.1-201ENST00000438328 629 ntBASIC2.59□□□□□ -1.99
CDH6P55285 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH6P55285 AC108938.1-201ENST00000451204 136 ntBASIC2.59□□□□□ -1.99
CDH6P55285 MTND2P24-201ENST00000453434 806 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC087588.1-201ENST00000462203 316 ntBASIC2.59□□□□□ -1.99
CDH6P55285 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH6P55285 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH6P55285 OR5BM1P-201ENST00000512021 366 ntBASIC2.59□□□□□ -1.99
CDH6P55285 RNU6-583P-201ENST00000516012 92 ntBASIC2.59□□□□□ -1.99
CDH6P55285 RNU6-1256P-201ENST00000516539 103 ntBASIC2.59□□□□□ -1.99
CDH6P55285 RNA5SP471-201ENST00000516971 106 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC090136.1-201ENST00000520009 240 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC004486.1-201ENST00000546846 233 ntBASIC2.59□□□□□ -1.99
CDH6P55285 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.59□□□□□ -1.99
CDH6P55285 AC103810.1-201ENST00000579873 453 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC060766.3-201ENST00000591442 263 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC068620.3-201ENST00000602749 560 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC068313.1-201ENST00000604028 1008 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC093673.2-201ENST00000609674 331 ntBASIC2.59□□□□□ -1.99
CDH6P55285 AC002550.2-201ENST00000621246 394 ntBASIC2.59□□□□□ -1.99
CDH6P55285 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CDH6P55285 AC126544.2-201ENST00000625174 749 ntBASIC2.59□□□□□ -1.99
CDH6P55285 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.59□□□□□ -2
CDH6P55285 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.59□□□□□ -2
CDH6P55285 AC022336.2-201ENST00000568966 2538 ntBASIC2.59□□□□□ -2
CDH6P55285 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDH6P55285 AC007785.2-201ENST00000598627 1916 ntBASIC2.58□□□□□ -2
CDH6P55285 RNA5SP456-201ENST00000364002 114 ntBASIC2.58□□□□□ -2
CDH6P55285 snoZ40.1-201ENST00000364540 72 ntBASIC2.58□□□□□ -2
CDH6P55285 RNU6-224P-201ENST00000384055 107 ntBASIC2.58□□□□□ -2
CDH6P55285 RNU1-138P-201ENST00000384093 164 ntBASIC2.58□□□□□ -2
CDH6P55285 MIR767-201ENST00000390228 109 ntBASIC2.58□□□□□ -2
CDH6P55285 AC096533.1-201ENST00000411645 353 ntBASIC2.58□□□□□ -2
CDH6P55285 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.58□□□□□ -2
CDH6P55285 AL139421.1-201ENST00000423010 169 ntBASIC2.58□□□□□ -2
CDH6P55285 AC009414.1-201ENST00000427200 443 ntBASIC2.58□□□□□ -2
CDH6P55285 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.58□□□□□ -2
CDH6P55285 BMI1P1-201ENST00000445879 941 ntBASIC2.58□□□□□ -2
CDH6P55285 ARPC3P5-201ENST00000448802 534 ntBASIC2.58□□□□□ -2
CDH6P55285 snoU13.8-201ENST00000458890 104 ntBASIC2.58□□□□□ -2
CDH6P55285 AP001486.1-201ENST00000463339 476 ntBASIC2.58□□□□□ -2
CDH6P55285 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
CDH6P55285 RPL37P25-201ENST00000507308 276 ntBASIC2.58□□□□□ -2
CDH6P55285 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.58□□□□□ -2
CDH6P55285 RN7SKP24-201ENST00000515888 284 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 483.8 ms