Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR4644-201ENST00000579929 84 ntBASIC3.97□□□□□ -1.77
COPB1P53618 MIR4425-201ENST00000580572 84 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AC008752.3-201ENST00000588113 712 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AC006077.1-201ENST00000604746 343 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AC006329.2-201ENST00000611491 394 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AL590099.1-201ENST00000615276 138 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AC099669.2-201ENST00000616549 437 ntBASIC3.97□□□□□ -1.77
COPB1P53618 AL159972.1-201ENST00000625150 448 ntBASIC3.97□□□□□ -1.77
COPB1P53618 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COPB1P53618 OTUD4P1-201ENST00000237841 3067 ntBASIC3.97□□□□□ -1.77
COPB1P53618 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.97□□□□□ -1.77
COPB1P53618 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.97□□□□□ -1.77
COPB1P53618 AL138713.1-201ENST00000624026 2130 ntBASIC3.97□□□□□ -1.77
COPB1P53618 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COPB1P53618 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.96□□□□□ -1.78
COPB1P53618 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.96□□□□□ -1.78
COPB1P53618 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 Y_RNA.295-201ENST00000364918 102 ntBASIC3.96□□□□□ -1.78
COPB1P53618 RNU6-761P-201ENST00000384148 107 ntBASIC3.96□□□□□ -1.78
COPB1P53618 MIR19A-201ENST00000384878 82 ntBASIC3.96□□□□□ -1.78
COPB1P53618 RNA5SP171-201ENST00000391071 115 ntBASIC3.96□□□□□ -1.78
COPB1P53618 RPS4XP8-201ENST00000402039 771 ntBASIC3.96□□□□□ -1.78
COPB1P53618 RNA5SP56-201ENST00000410277 118 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.96□□□□□ -1.78
COPB1P53618 MTATP6P18-201ENST00000417994 673 ntBASIC3.96□□□□□ -1.78
COPB1P53618 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 AC005517.2-201ENST00000424673 553 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 AL158071.1-201ENST00000430315 461 ntBASIC3.96□□□□□ -1.78
COPB1P53618 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.96□□□□□ -1.78
COPB1P53618 TIMM9P1-201ENST00000436122 256 ntBASIC3.96□□□□□ -1.78
COPB1P53618 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 ANP32BP2-201ENST00000454525 545 ntBASIC3.96□□□□□ -1.78
COPB1P53618 snoU109.4-201ENST00000458953 143 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AC004801.2-202ENST00000463559 283 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AL139099.1-201ENST00000497398 403 ntBASIC3.96□□□□□ -1.78
COPB1P53618 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.96□□□□□ -1.78
COPB1P53618 AC117522.1-201ENST00000509821 380 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 TMEM248P1-201ENST00000510579 951 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.96□□□□□ -1.78
COPB1P53618 AC008549.1-201ENST00000512900 643 ntBASIC3.96□□□□□ -1.78
COPB1P53618 FTH1P9-201ENST00000513251 355 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AC017037.2-201ENST00000513850 890 ntBASIC3.96□□□□□ -1.78
COPB1P53618 RNU6-579P-201ENST00000516879 102 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.96□□□□□ -1.78
COPB1P53618 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.96□□□□□ -1.78
COPB1P53618 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.96□□□□□ -1.78
COPB1P53618 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 KC877982.1-201ENST00000602313 470 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AL355812.1-201ENST00000603215 216 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AL136363.1-201ENST00000605349 337 ntBASIC3.96□□□□□ -1.78
COPB1P53618 RMST_8.1-201ENST00000610287 165 ntBASIC3.96□□□□□ -1.78
COPB1P53618 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
COPB1P53618 AC025253.1-201ENST00000613623 543 ntBASIC3.96□□□□□ -1.78
COPB1P53618 uc_338.12-201ENST00000616344 181 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AL354798.1-201ENST00000622505 329 ntBASIC3.96□□□□□ -1.78
COPB1P53618 AC009161.2-201ENST00000624626 138 ntBASIC3.96□□□□□ -1.78
COPB1P53618 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.96□□□□□ -1.78
COPB1P53618 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
COPB1P53618 AC068647.1-201ENST00000489539 2265 ntBASIC3.96□□□□□ -1.78
COPB1P53618 ZNF33CP-201ENST00000432492 2030 ntBASIC3.95□□□□□ -1.78
COPB1P53618 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COPB1P53618 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COPB1P53618 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
COPB1P53618 SNORA72.1-201ENST00000363485 129 ntBASIC3.95□□□□□ -1.78
COPB1P53618 Y_RNA.481-201ENST00000384373 102 ntBASIC3.95□□□□□ -1.78
COPB1P53618 MT-TC-201ENST00000387405 66 ntBASIC3.95□□□□□ -1.78
COPB1P53618 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COPB1P53618 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COPB1P53618 U3.39-201ENST00000408569 239 ntBASIC3.95□□□□□ -1.78
COPB1P53618 RNU6-908P-201ENST00000410160 94 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AL139413.1-201ENST00000421309 217 ntBASIC3.95□□□□□ -1.78
COPB1P53618 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.95□□□□□ -1.78
COPB1P53618 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.95□□□□□ -1.78
COPB1P53618 AC119618.1-201ENST00000434191 222 ntBASIC3.95□□□□□ -1.78
COPB1P53618 RPS29P7-201ENST00000439662 171 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.95□□□□□ -1.78
COPB1P53618 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.95□□□□□ -1.78
COPB1P53618 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.95□□□□□ -1.78
COPB1P53618 AL358232.1-201ENST00000448030 501 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AC010655.1-201ENST00000449336 292 ntBASIC3.95□□□□□ -1.78
COPB1P53618 RNU6-420P-201ENST00000458780 107 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.95□□□□□ -1.78
COPB1P53618 SNORA20.3-201ENST00000516880 132 ntBASIC3.95□□□□□ -1.78
COPB1P53618 NDUFB9P3-201ENST00000521269 501 ntBASIC3.95□□□□□ -1.78
COPB1P53618 MTND1P35-201ENST00000526739 508 ntBASIC3.95□□□□□ -1.78
COPB1P53618 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.95□□□□□ -1.78
COPB1P53618 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms