Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 HMGB1P17-201ENST00000403495 628 ntBASIC2.53□□□□□ -2
SLC1A1P43005 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.53□□□□□ -2
SLC1A1P43005 OR4K6P-201ENST00000416478 897 ntBASIC2.53□□□□□ -2
SLC1A1P43005 COTL1P1-201ENST00000422309 375 ntBASIC2.53□□□□□ -2
SLC1A1P43005 MTCO2P5-201ENST00000422621 426 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.53□□□□□ -2
SLC1A1P43005 AL139421.1-201ENST00000423010 169 ntBASIC2.53□□□□□ -2
SLC1A1P43005 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.53□□□□□ -2
SLC1A1P43005 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.53□□□□□ -2
SLC1A1P43005 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.53□□□□□ -2
SLC1A1P43005 RNU6-420P-201ENST00000458780 107 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AL135752.1-201ENST00000479477 471 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.53□□□□□ -2
SLC1A1P43005 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.53□□□□□ -2
SLC1A1P43005 SUMO2P5-201ENST00000506790 245 ntBASIC2.53□□□□□ -2
SLC1A1P43005 TTC39CP1-201ENST00000512513 755 ntBASIC2.53□□□□□ -2
SLC1A1P43005 RNU6-528P-201ENST00000516926 100 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.53□□□□□ -2
SLC1A1P43005 OR4R1P-201ENST00000529879 463 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AMZ2P1-203ENST00000565833 850 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC025281.1-201ENST00000567026 265 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC104072.1-201ENST00000568817 668 ntBASIC2.53□□□□□ -2
SLC1A1P43005 MYL12BP1-201ENST00000569826 507 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC061975.8-201ENST00000587058 721 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC013553.2-201ENST00000604244 589 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC004067.1-201ENST00000608733 700 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC024257.5-201ENST00000612739 531 ntBASIC2.53□□□□□ -2
SLC1A1P43005 AC008443.7-201ENST00000622195 246 ntBASIC2.53□□□□□ -2
SLC1A1P43005 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.53□□□□□ -2
SLC1A1P43005 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC1A1P43005 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
SLC1A1P43005 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
SLC1A1P43005 AC062016.1-201ENST00000355719 319 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 Y_RNA.548-201ENST00000384656 105 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 MIR518C-201ENST00000384822 101 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 RPS4XP7-201ENST00000406274 780 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 Z92545.1-201ENST00000411782 234 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AC068533.2-201ENST00000411872 306 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC1A1P43005 NDUFB4P7-201ENST00000423198 363 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AL356867.1-201ENST00000429623 299 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC1A1P43005 FCF1P1-201ENST00000432690 571 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AP000949.1-201ENST00000438328 629 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC1A1P43005 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC1A1P43005 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC1A1P43005 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC1A1P43005 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC1A1P43005 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.52□□□□□ -2.01
SLC1A1P43005 AC093752.1-206ENST00000511823 336 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AC087241.2-201ENST00000535801 324 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AC090888.1-201ENST00000561335 1141 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 HMGB1P6-201ENST00000569046 646 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC1A1P43005 AC010620.2-201ENST00000600135 313 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AL022067.1-201ENST00000602426 454 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AL033523.1-201ENST00000605153 153 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 RNU6-1192P-201ENST00000612197 107 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 MIR7106-201ENST00000612419 65 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 RNU6-489P-201ENST00000618289 107 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 MIR6130-201ENST00000619419 109 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AC103798.2-201ENST00000624292 632 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 AC068880.5-201ENST00000624331 290 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 MIR1291-201ENST00000627649 87 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 MTCO1P9-201ENST00000505577 1534 ntBASIC2.52□□□□□ -2.01
SLC1A1P43005 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC1A1P43005 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLC1A1P43005 OR4G2P-202ENST00000641004 1759 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLC1A1P43005 AC069528.2-201ENST00000624849 1991 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.51□□□□□ -2.01
SLC1A1P43005 MIR144-201ENST00000384886 86 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 MIR514A1-201ENST00000385133 98 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 RNA5SP184-201ENST00000411071 108 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 AL590383.1-201ENST00000428602 75 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 AL512844.2-201ENST00000433990 593 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC1A1P43005 ARPC3P1-201ENST00000437218 533 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SLC1A1P43005 RPS15AP7-201ENST00000439294 405 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC1A1P43005 AL513328.1-201ENST00000446460 224 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLC1A1P43005 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.51□□□□□ -2.01
SLC1A1P43005 RNU6-583P-201ENST00000516012 92 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 RNU6-1256P-201ENST00000516539 103 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 LRRC6P1-201ENST00000532188 885 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC1A1P43005 AC068135.2-201ENST00000569293 1028 ntBASIC2.51□□□□□ -2.01
SLC1A1P43005 MIR4319-201ENST00000577285 85 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms