Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC013553.2-201ENST00000604244 589 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AL121992.2-201ENST00000606262 256 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AP001486.3-201ENST00000615334 372 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 SNHG22-203ENST00000617833 660 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 AC022140.2-201ENST00000623500 188 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SLC6A4P31645 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SLC6A4P31645 OR4G1P-203ENST00000641984 1631 ntBASIC4.13□□□□□ -1.75
SLC6A4P31645 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SLC6A4P31645 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC6A4P31645 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC6A4P31645 RNA5SP52-201ENST00000362448 134 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 RNU6-845P-201ENST00000362578 103 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 RNU6-179P-201ENST00000363350 107 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 RNU6-960P-201ENST00000364056 120 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 RNU6-1279P-201ENST00000383917 103 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SLC6A4P31645 RNU2-29P-201ENST00000410423 189 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 RNU6-712P-201ENST00000410558 100 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 RNU6-193P-201ENST00000410977 107 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 RPL21P24-201ENST00000413752 448 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 SDCBPP3-201ENST00000419629 891 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 SRIP2-201ENST00000428470 166 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC6A4P31645 AL162389.1-201ENST00000449233 177 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC6A4P31645 MRPS17P3-201ENST00000465453 385 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC6A4P31645 NIPA2P2-201ENST00000496376 1083 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 EIF4EP3-201ENST00000498782 656 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC091885.1-201ENST00000506658 268 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC6A4P31645 RNA5SP179-201ENST00000517284 121 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC6A4P31645 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC6A4P31645 CBX3P7-201ENST00000532876 502 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC018630.1-201ENST00000541376 925 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC6A4P31645 YPEL5P3-201ENST00000547227 352 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC091516.1-201ENST00000549191 703 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 ARL2BPP2-201ENST00000550907 489 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC6A4P31645 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC6A4P31645 AC022968.1-201ENST00000567372 442 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.12□□□□□ -1.75
SLC6A4P31645 AL670379.6-201ENST00000603753 252 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AL670379.11-201ENST00000604059 253 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC008162.1-201ENST00000604718 254 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AL670379.1-201ENST00000604752 252 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC6A4P31645 AL670379.5-201ENST00000605253 252 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AL670379.12-201ENST00000605291 253 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AL670379.8-201ENST00000605353 252 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AL670379.7-201ENST00000605823 252 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC010338.1-201ENST00000621823 717 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.12□□□□□ -1.75
SLC6A4P31645 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC6A4P31645 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC6A4P31645 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC6A4P31645 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC6A4P31645 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SLC6A4P31645 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.12□□□□□ -1.75
SLC6A4P31645 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.12□□□□□ -1.75
SLC6A4P31645 GABPAP-201ENST00000419271 1356 ntBASIC4.12□□□□□ -1.75
SLC6A4P31645 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SLC6A4P31645 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SLC6A4P31645 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 AL139276.1-201ENST00000311910 1001 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 Y_RNA.142-201ENST00000363491 102 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SLC6A4P31645 SNORD37.1-201ENST00000390968 65 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 RNA5SP44-201ENST00000410446 133 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 RNU6-387P-201ENST00000411331 105 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 UBE2FP1-201ENST00000416536 447 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 RPS12P23-201ENST00000419579 400 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC6A4P31645 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC6A4P31645 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.11□□□□□ -1.75
SLC6A4P31645 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.11□□□□□ -1.75
SLC6A4P31645 MTND1P18-201ENST00000448191 573 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.11□□□□□ -1.75
SLC6A4P31645 RPL23AP11-201ENST00000475260 469 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 RN7SL132P-201ENST00000478131 296 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 AC026427.2-201ENST00000506228 536 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC017037.1-201ENST00000508460 471 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC006499.6-201ENST00000511169 607 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 RNU4-29P-201ENST00000515943 174 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 RNU6-1092P-201ENST00000516955 87 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC023632.4-201ENST00000517783 191 ntBASIC4.11□□□□□ -1.75
SLC6A4P31645 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.11□□□□□ -1.75
SLC6A4P31645 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms