Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC034222.1-201ENST00000494052 532 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.15□□□□□ -1.74
POLR2AP24928 RNU4-49P-201ENST00000516080 140 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 RNU6-150P-201ENST00000516237 95 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.15□□□□□ -1.74
POLR2AP24928 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.15□□□□□ -1.74
POLR2AP24928 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
POLR2AP24928 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.15□□□□□ -1.74
POLR2AP24928 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.15□□□□□ -1.74
POLR2AP24928 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.15□□□□□ -1.74
POLR2AP24928 AC068714.1-201ENST00000559623 800 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC090877.1-201ENST00000561418 344 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AC010653.1-201ENST00000571108 881 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 VN1R80P-201ENST00000597126 338 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AL365204.3-201ENST00000612448 685 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.15□□□□□ -1.74
POLR2AP24928 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
POLR2AP24928 CYP3A51P-201ENST00000633513 256 ntBASIC4.15□□□□□ -1.74
POLR2AP24928 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.15□□□□□ -1.75
POLR2AP24928 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
POLR2AP24928 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
POLR2AP24928 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
POLR2AP24928 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 SNORA32.2-201ENST00000384049 122 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RPL7P25-201ENST00000404151 721 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
POLR2AP24928 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.14□□□□□ -1.75
POLR2AP24928 TIMM9P1-201ENST00000436122 256 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.14□□□□□ -1.75
POLR2AP24928 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.14□□□□□ -1.75
POLR2AP24928 FGF7P3-201ENST00000454645 303 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
POLR2AP24928 MTCO1P29-201ENST00000496868 288 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 HMGN1P13-201ENST00000505795 138 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RNU6-410P-201ENST00000517006 107 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.14□□□□□ -1.75
POLR2AP24928 HSPE1P14-201ENST00000605812 302 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
POLR2AP24928 AC006020.1-201ENST00000420179 1854 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.14□□□□□ -1.75
POLR2AP24928 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
POLR2AP24928 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
POLR2AP24928 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
POLR2AP24928 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
POLR2AP24928 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.14□□□□□ -1.75
POLR2AP24928 AC007656.2-201ENST00000624902 4547 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RNA5SP42-201ENST00000364278 115 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 SNORA69-201ENST00000383895 132 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RNU6-533P-201ENST00000384144 107 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RNU6-878P-201ENST00000384578 110 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 MIR137-201ENST00000385223 102 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RNU6-1158P-201ENST00000391167 107 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RNU6-908P-201ENST00000410160 94 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 OR1AA1P-201ENST00000419597 916 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AC092832.1-201ENST00000422934 400 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 RNU7-66P-201ENST00000459469 62 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 RPL21P6-201ENST00000479171 504 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AC020893.1-201ENST00000502452 580 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 AP003497.1-201ENST00000528472 562 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.14□□□□□ -1.75
POLR2AP24928 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.14□□□□□ -1.75
POLR2AP24928 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.14□□□□□ -1.75
POLR2AP24928 SUB1P2-201ENST00000556401 297 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 MIR4513-201ENST00000581077 86 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AL133255.1-201ENST00000606374 441 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AP001521.1-201ENST00000609150 300 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 AC009233.1-201ENST00000616477 371 ntBASIC4.14□□□□□ -1.75
POLR2AP24928 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
POLR2AP24928 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
POLR2AP24928 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.14□□□□□ -1.75
POLR2AP24928 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
POLR2AP24928 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
POLR2AP24928 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.13□□□□□ -1.75
POLR2AP24928 AC092447.10-201ENST00000620607 1652 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AL353193.1-201ENST00000421444 268 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 RPL12P46-201ENST00000436610 195 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.13□□□□□ -1.75
POLR2AP24928 AP1S2P1-201ENST00000457344 379 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC023194.1-201ENST00000493084 308 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC093677.1-201ENST00000514414 678 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.13□□□□□ -1.75
POLR2AP24928 COX6CP8-201ENST00000522620 226 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC034105.3-201ENST00000565294 442 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC018552.3-201ENST00000567416 561 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.13□□□□□ -1.75
POLR2AP24928 AC006504.6-201ENST00000590142 199 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC078899.5-201ENST00000612475 178 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AL603758.1-201ENST00000618654 241 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.13□□□□□ -1.75
POLR2AP24928 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.13□□□□□ -1.75
POLR2AP24928 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
POLR2AP24928 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms