Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 HIGD1AP13-201ENST00000509878 289 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AC026801.2-201ENST00000515352 425 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 SNORA31.1-201ENST00000515993 133 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 SNORA31.5-201ENST00000516190 133 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 SETP2-201ENST00000553886 926 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.82□□□□□ -1.96
XRCC1P18887 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.82□□□□□ -1.96
XRCC1P18887 MTCO3P13-201ENST00000577757 781 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AC011260.1-201ENST00000578420 472 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AL050303.3-201ENST00000613704 284 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 AL138880.2-201ENST00000616214 239 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 Z99129.2-201ENST00000619967 314 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.82□□□□□ -1.96
XRCC1P18887 AC092447.7-201ENST00000422212 1621 ntBASIC2.82□□□□□ -1.96
XRCC1P18887 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.82□□□□□ -1.96
XRCC1P18887 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.82□□□□□ -1.96
XRCC1P18887 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
XRCC1P18887 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 SDAD1P2-201ENST00000441308 2028 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.81□□□□□ -1.96
XRCC1P18887 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
XRCC1P18887 OR5J1P-201ENST00000313544 939 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 SNORA4.1-201ENST00000364263 144 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 RNU6-1078P-201ENST00000364522 103 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 RNU6-744P-201ENST00000365557 107 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 RNU6-1316P-201ENST00000384242 108 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 RNU6-83P-201ENST00000384568 112 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 MIR320C1-201ENST00000408566 88 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 RNU6-757P-201ENST00000410334 100 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 MTND1P21-201ENST00000412991 285 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 MTCO2P21-201ENST00000419780 677 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
XRCC1P18887 AL356867.1-201ENST00000429623 299 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AC109583.1-201ENST00000432156 268 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 UBE2V1P13-201ENST00000436983 439 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.81□□□□□ -1.96
XRCC1P18887 AC025750.2-201ENST00000442609 450 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 EEF1E1P1-201ENST00000446998 430 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.81□□□□□ -1.96
XRCC1P18887 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.81□□□□□ -1.96
XRCC1P18887 AL590664.1-201ENST00000448065 339 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.81□□□□□ -1.96
XRCC1P18887 RPL30P9-201ENST00000465586 330 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AL049714.1-201ENST00000466686 347 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 RN7SL297P-201ENST00000483161 293 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AC020699.1-201ENST00000505161 445 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.81□□□□□ -1.96
XRCC1P18887 DUXAP1-201ENST00000556632 463 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.81□□□□□ -1.96
XRCC1P18887 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 AC061975.8-201ENST00000587058 721 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AP000254.1-201ENST00000609934 520 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AL136981.2-201ENST00000617319 734 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AL159972.1-201ENST00000625150 448 ntBASIC2.81□□□□□ -1.96
XRCC1P18887 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
XRCC1P18887 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
XRCC1P18887 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
XRCC1P18887 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
XRCC1P18887 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.8□□□□□ -1.96
XRCC1P18887 ZNF876P-202ENST00000398732 1485 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
XRCC1P18887 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.8□□□□□ -1.96
XRCC1P18887 PPP1R11P2-201ENST00000423543 382 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.8□□□□□ -1.96
XRCC1P18887 AC234781.2-201ENST00000426370 994 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AC112653.1-201ENST00000443851 386 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 Z73417.1-201ENST00000447373 778 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 MTCO1P27-201ENST00000448269 226 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 RPL37P4-201ENST00000448908 268 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 ANKRD26P4-201ENST00000455755 950 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AL359385.1-201ENST00000456509 365 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 RPL30P14-201ENST00000482744 348 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
XRCC1P18887 AC034244.1-201ENST00000507687 207 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AC109464.2-201ENST00000510242 943 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 HMGN1P28-201ENST00000521340 364 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.8□□□□□ -1.96
XRCC1P18887 AP003497.1-201ENST00000528472 562 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 UBTFL10-201ENST00000528532 562 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.8□□□□□ -1.96
XRCC1P18887 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.8□□□□□ -1.96
XRCC1P18887 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.8□□□□□ -1.96
XRCC1P18887 AC024153.1-201ENST00000603103 365 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.8□□□□□ -1.96
XRCC1P18887 AL355493.4-201ENST00000618530 292 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AC009268.2-201ENST00000621925 457 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 AC009039.2-201ENST00000624524 529 ntBASIC2.8□□□□□ -1.96
XRCC1P18887 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
XRCC1P18887 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.8□□□□□ -1.96
XRCC1P18887 AC087359.1-201ENST00000508335 1740 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
XRCC1P18887 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AP000526.1-201ENST00000603308 1388 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms