Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC021146.5-201ENST00000503544 545 ntBASIC3.19□□□□□ -1.9
SIX3O95343 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX3O95343 AC112673.1-201ENST00000513168 575 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX3O95343 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX3O95343 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX3O95343 AP002748.2-201ENST00000528671 348 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AP000857.1-201ENST00000532151 543 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX3O95343 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.19□□□□□ -1.9
SIX3O95343 AC007954.1-201ENST00000554198 494 ntBASIC3.19□□□□□ -1.9
SIX3O95343 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX3O95343 AC005951.2-201ENST00000576282 495 ntBASIC3.19□□□□□ -1.9
SIX3O95343 MTATP6P24-201ENST00000576835 677 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AP001004.1-201ENST00000582468 324 ntBASIC3.19□□□□□ -1.9
SIX3O95343 UBE2L4-201ENST00000587688 464 ntBASIC3.19□□□□□ -1.9
SIX3O95343 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX3O95343 AC068313.1-201ENST00000604028 1008 ntBASIC3.19□□□□□ -1.9
SIX3O95343 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIX3O95343 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX3O95343 AC090132.2-201ENST00000615881 347 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.19□□□□□ -1.9
SIX3O95343 AL158801.5-201ENST00000623123 465 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AP000770.2-201ENST00000623694 100 ntBASIC3.19□□□□□ -1.9
SIX3O95343 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.19□□□□□ -1.9
SIX3O95343 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SIX3O95343 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SIX3O95343 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
SIX3O95343 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
SIX3O95343 AC007785.2-201ENST00000598627 1916 ntBASIC3.19□□□□□ -1.9
SIX3O95343 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SIX3O95343 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SIX3O95343 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 AL391994.1-201ENST00000254724 282 ntBASIC3.18□□□□□ -1.9
SIX3O95343 RNA5SP383-201ENST00000362934 120 ntBASIC3.18□□□□□ -1.9
SIX3O95343 RNU6-805P-201ENST00000365643 106 ntBASIC3.18□□□□□ -1.9
SIX3O95343 RNU6-1027P-201ENST00000383998 107 ntBASIC3.18□□□□□ -1.9
SIX3O95343 RNU6-769P-201ENST00000384407 104 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC110754.1-201ENST00000399740 601 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AL031121.1-201ENST00000406553 254 ntBASIC3.18□□□□□ -1.9
SIX3O95343 CCNG1P1-201ENST00000406783 885 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 RAP1BP1-201ENST00000412709 553 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 AC011233.1-201ENST00000422812 283 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 AL445669.1-201ENST00000426743 755 ntBASIC3.18□□□□□ -1.9
SIX3O95343 MTND5P25-201ENST00000430499 799 ntBASIC3.18□□□□□ -1.9
SIX3O95343 RPL22P17-201ENST00000438729 315 ntBASIC3.18□□□□□ -1.9
SIX3O95343 PIGFP3-201ENST00000441918 722 ntBASIC3.18□□□□□ -1.9
SIX3O95343 CBWD4P-201ENST00000445695 655 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 AC125238.1-201ENST00000448842 249 ntBASIC3.18□□□□□ -1.9
SIX3O95343 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 RPL37P6-201ENST00000460682 294 ntBASIC3.18□□□□□ -1.9
SIX3O95343 RN7SL807P-201ENST00000470923 297 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.18□□□□□ -1.9
SIX3O95343 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.18□□□□□ -1.9
SIX3O95343 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 RNU6-928P-201ENST00000516876 104 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 ZNF321P-202ENST00000550843 495 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 ACTR3BP3-201ENST00000565577 979 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.18□□□□□ -1.9
SIX3O95343 MIR4276-201ENST00000584832 70 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC018714.1-201ENST00000605028 208 ntBASIC3.18□□□□□ -1.9
SIX3O95343 OR10AB1P-201ENST00000609613 938 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC090970.3-201ENST00000612566 866 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 AP003122.6-201ENST00000623831 495 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC091903.1-201ENST00000624322 454 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AC008993.2-201ENST00000631744 806 ntBASIC3.18□□□□□ -1.9
SIX3O95343 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.18□□□□□ -1.9
SIX3O95343 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX3O95343 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SIX3O95343 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SIX3O95343 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
SIX3O95343 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
SIX3O95343 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
SIX3O95343 MTND5P33-201ENST00000571250 1450 ntBASIC3.17□□□□□ -1.9
SIX3O95343 RNY4P24-201ENST00000362735 96 ntBASIC3.17□□□□□ -1.9
SIX3O95343 RNU6-741P-201ENST00000383889 107 ntBASIC3.17□□□□□ -1.9
SIX3O95343 SNORA48.8-201ENST00000391324 134 ntBASIC3.17□□□□□ -1.9
SIX3O95343 RNA5SP293-201ENST00000410527 113 ntBASIC3.17□□□□□ -1.9
SIX3O95343 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX3O95343 RPL23AP39-201ENST00000415533 405 ntBASIC3.17□□□□□ -1.9
SIX3O95343 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.17□□□□□ -1.9
SIX3O95343 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.17□□□□□ -1.9
SIX3O95343 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.17□□□□□ -1.9
SIX3O95343 RPL23AP22-201ENST00000437556 453 ntBASIC3.17□□□□□ -1.9
SIX3O95343 FTH1P1-201ENST00000437933 532 ntBASIC3.17□□□□□ -1.9
SIX3O95343 MTND5P2-201ENST00000442927 1142 ntBASIC3.17□□□□□ -1.9
SIX3O95343 MTCO3P45-201ENST00000443036 613 ntBASIC3.17□□□□□ -1.9
SIX3O95343 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms