Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AL157394.1-201ENST00000562983 1224 ntBASIC3.09□□□□□ -1.91
SNX3O60493 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.09□□□□□ -1.91
SNX3O60493 AF038458.1-201ENST00000588406 262 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX3O60493 AC112191.3-201ENST00000604371 277 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AL590392.1-201ENST00000604960 446 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC068276.1-201ENST00000605793 379 ntBASIC3.09□□□□□ -1.91
SNX3O60493 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX3O60493 AL390240.1-201ENST00000612950 384 ntBASIC3.09□□□□□ -1.91
SNX3O60493 uc_338.25-201ENST00000613756 156 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AL157817.1-201ENST00000614264 790 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX3O60493 AC090132.2-201ENST00000615881 347 ntBASIC3.09□□□□□ -1.91
SNX3O60493 MIR6875-201ENST00000617506 72 ntBASIC3.09□□□□□ -1.91
SNX3O60493 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX3O60493 AC009878.1-201ENST00000621819 340 ntBASIC3.09□□□□□ -1.91
SNX3O60493 Z69908.1-201ENST00000622603 247 ntBASIC3.09□□□□□ -1.91
SNX3O60493 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.09□□□□□ -1.91
SNX3O60493 AL136313.1-201ENST00000624804 202 ntBASIC3.09□□□□□ -1.91
SNX3O60493 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SNX3O60493 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SNX3O60493 AC091152.2-201ENST00000591628 2569 ntBASIC3.09□□□□□ -1.91
SNX3O60493 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
SNX3O60493 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.09□□□□□ -1.92
SNX3O60493 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.09□□□□□ -1.92
SNX3O60493 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.92
SNX3O60493 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.09□□□□□ -1.92
SNX3O60493 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SNX3O60493 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX3O60493 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.08□□□□□ -1.92
SNX3O60493 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.08□□□□□ -1.92
SNX3O60493 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX3O60493 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.08□□□□□ -1.92
SNX3O60493 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX3O60493 SNORD88.1-201ENST00000408684 91 ntBASIC3.08□□□□□ -1.92
SNX3O60493 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
SNX3O60493 RPL21P24-201ENST00000413752 448 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX3O60493 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX3O60493 TRIAP1P1-201ENST00000427062 225 ntBASIC3.08□□□□□ -1.92
SNX3O60493 C4BPAP2-201ENST00000428434 478 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC098826.1-201ENST00000433943 471 ntBASIC3.08□□□□□ -1.92
SNX3O60493 MTND1P28-201ENST00000435623 950 ntBASIC3.08□□□□□ -1.92
SNX3O60493 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX3O60493 AC005094.1-201ENST00000440420 368 ntBASIC3.08□□□□□ -1.92
SNX3O60493 COX6CP2-201ENST00000444980 225 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.08□□□□□ -1.92
SNX3O60493 GSTA11P-201ENST00000452866 669 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC073387.1-201ENST00000453261 709 ntBASIC3.08□□□□□ -1.92
SNX3O60493 RBMY2UP-201ENST00000453474 324 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC025518.1-201ENST00000479856 347 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.08□□□□□ -1.92
SNX3O60493 AC068724.1-201ENST00000487100 792 ntBASIC3.08□□□□□ -1.92
SNX3O60493 RN7SL20P-201ENST00000488827 297 ntBASIC3.08□□□□□ -1.92
SNX3O60493 RN7SL633P-201ENST00000488974 297 ntBASIC3.08□□□□□ -1.92
SNX3O60493 CEACAMP10-202ENST00000495431 496 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC080014.1-201ENST00000496877 1201 ntBASIC3.08□□□□□ -1.92
SNX3O60493 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.08□□□□□ -1.92
SNX3O60493 AC117532.1-201ENST00000514638 323 ntBASIC3.08□□□□□ -1.92
SNX3O60493 RNU6-64P-201ENST00000517119 105 ntBASIC3.08□□□□□ -1.92
SNX3O60493 MIR2116-201ENST00000517221 80 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC107934.1-201ENST00000522215 217 ntBASIC3.08□□□□□ -1.92
SNX3O60493 OR5G4P-201ENST00000525251 760 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC022690.1-201ENST00000526681 550 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC103843.2-201ENST00000530523 682 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC123904.3-201ENST00000547218 814 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX3O60493 RN7SL703P-201ENST00000578485 302 ntBASIC3.08□□□□□ -1.92
SNX3O60493 MIR2682-201ENST00000580305 110 ntBASIC3.08□□□□□ -1.92
SNX3O60493 MIR3146-201ENST00000580367 79 ntBASIC3.08□□□□□ -1.92
SNX3O60493 MIR3118-1-201ENST00000581787 76 ntBASIC3.08□□□□□ -1.92
SNX3O60493 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX3O60493 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.08□□□□□ -1.92
SNX3O60493 AL031985.2-201ENST00000600955 480 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.08□□□□□ -1.92
SNX3O60493 BX323046.1-201ENST00000610145 535 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC090970.3-201ENST00000612566 866 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC107871.2-201ENST00000612894 502 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC083809.1-201ENST00000615051 472 ntBASIC3.08□□□□□ -1.92
SNX3O60493 AC091953.2-201ENST00000623979 160 ntBASIC3.08□□□□□ -1.92
SNX3O60493 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SNX3O60493 AC008568.2-201ENST00000623862 2313 ntBASIC3.08□□□□□ -1.92
SNX3O60493 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.08□□□□□ -1.92
SNX3O60493 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX3O60493 AC002546.1-201ENST00000588041 2504 ntBASIC3.08□□□□□ -1.92
SNX3O60493 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNX3O60493 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX3O60493 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SNX3O60493 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SNX3O60493 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SNX3O60493 RNY4P16-201ENST00000364768 94 ntBASIC3.07□□□□□ -1.92
SNX3O60493 SNORD116-1-201ENST00000384335 95 ntBASIC3.07□□□□□ -1.92
SNX3O60493 RNY3P10-201ENST00000384764 102 ntBASIC3.07□□□□□ -1.92
SNX3O60493 FCF1P10-201ENST00000407590 479 ntBASIC3.07□□□□□ -1.92
SNX3O60493 Y_RNA.598-201ENST00000410480 95 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX3O60493 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.07□□□□□ -1.92
SNX3O60493 AL451074.5-201ENST00000415894 435 ntBASIC3.07□□□□□ -1.92
SNX3O60493 BX842559.1-201ENST00000419615 532 ntBASIC3.07□□□□□ -1.92
SNX3O60493 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms