Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MIR1291-201ENST00000627649 87 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 TEX41-300ENST00000631048 69 ntTSL 5 BASIC1.9□□□□□ -2.11
SSNA1O43805 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SSNA1O43805 AL359851.1-201ENST00000569460 4997 ntBASIC1.9□□□□□ -2.11
SSNA1O43805 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SSNA1O43805 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SSNA1O43805 MIR16-2-201ENST00000362117 81 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 SNORA38.1-201ENST00000364172 131 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 RNU6-1083P-201ENST00000384022 107 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 RNU6-140P-201ENST00000384566 108 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 MIR218-1-201ENST00000384999 110 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 SNORA11B-201ENST00000408175 129 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.89□□□□□ -2.11
SSNA1O43805 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.89□□□□□ -2.11
SSNA1O43805 FAM204CP-201ENST00000424489 642 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 RPL35AP12-201ENST00000425362 338 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 AC008850.1-201ENST00000427546 362 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.89□□□□□ -2.11
SSNA1O43805 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.89□□□□□ -2.11
SSNA1O43805 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC1.89□□□□□ -2.11
SSNA1O43805 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.89□□□□□ -2.11
SSNA1O43805 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.89□□□□□ -2.11
SSNA1O43805 RPL12P25-201ENST00000455592 494 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 AC025181.1-201ENST00000477507 416 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 OR4G11P-201ENST00000492842 939 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.89□□□□□ -2.11
SSNA1O43805 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.89□□□□□ -2.11
SSNA1O43805 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.89□□□□□ -2.11
SSNA1O43805 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.89□□□□□ -2.11
SSNA1O43805 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.89□□□□□ -2.11
SSNA1O43805 AC079600.2-201ENST00000550076 130 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.89□□□□□ -2.11
SSNA1O43805 ZNF971P-201ENST00000562068 1249 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 AC136624.4-201ENST00000573044 370 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 AC005951.2-201ENST00000576282 495 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 MIR4666A-201ENST00000580160 79 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 MIR4448-201ENST00000584360 86 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 AL589743.7-201ENST00000612637 233 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 uc_338.20-201ENST00000621563 178 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 U6.105-201ENST00000637379 88 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.89□□□□□ -2.11
SSNA1O43805 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
SSNA1O43805 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.89□□□□□ -2.11
SSNA1O43805 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.89□□□□□ -2.11
SSNA1O43805 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.88□□□□□ -2.11
SSNA1O43805 CENPCP1-201ENST00000533085 2578 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 ZNF658B-202ENST00000615961 3375 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SSNA1O43805 RNU6-1066P-201ENST00000363573 105 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 RNU6-884P-201ENST00000363889 107 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 SUGT1P1-201ENST00000379514 476 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
SSNA1O43805 UBA52P6-201ENST00000399822 382 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 CIR1P3-201ENST00000405137 479 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.88□□□□□ -2.11
SSNA1O43805 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 EIF4EP4-201ENST00000424916 578 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 FCF1P1-201ENST00000432690 571 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 MTCYBP45-201ENST00000435243 565 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.88□□□□□ -2.11
SSNA1O43805 GPM6BP3-201ENST00000442797 145 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 RNU6-775P-201ENST00000459318 96 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AC026410.2-201ENST00000460281 156 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.88□□□□□ -2.11
SSNA1O43805 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SSNA1O43805 WBP1LP4-201ENST00000505043 344 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.88□□□□□ -2.11
SSNA1O43805 AC118465.1-201ENST00000513820 1271 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.88□□□□□ -2.11
SSNA1O43805 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.88□□□□□ -2.11
SSNA1O43805 MIR3160-1-201ENST00000577972 85 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 LRRC37A5P-203ENST00000580181 585 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.88□□□□□ -2.11
SSNA1O43805 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.88□□□□□ -2.11
SSNA1O43805 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.88□□□□□ -2.11
SSNA1O43805 AL021997.1-201ENST00000605757 193 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AC107214.2-201ENST00000608204 634 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 FTX_3.1-201ENST00000610451 147 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AL161423.1-201ENST00000613700 262 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AL603758.1-201ENST00000618654 241 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AL356863.1-201ENST00000623378 1080 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.88□□□□□ -2.11
SSNA1O43805 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC1.88□□□□□ -2.11
SSNA1O43805 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.88□□□□□ -2.11
SSNA1O43805 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
SSNA1O43805 KPNA2P1-201ENST00000458289 1591 ntBASIC1.88□□□□□ -2.11
SSNA1O43805 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
SSNA1O43805 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SSNA1O43805 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SSNA1O43805 RNU6-549P-201ENST00000384433 107 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 MIR200C-201ENST00000384980 68 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 MIR17-201ENST00000385012 84 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SSNA1O43805 SNORA46.1-201ENST00000391069 153 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 RPL23AP29-201ENST00000397284 453 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 AL139039.1-201ENST00000401900 692 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 UBE2V1P15-201ENST00000407776 448 ntBASIC1.87□□□□□ -2.11
SSNA1O43805 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms