Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
CLOCKO15516 SNORA31.11-201ENST00000516528 139 ntBASIC2.54□□□□□ -2
CLOCKO15516 RNU6-1256P-201ENST00000516539 103 ntBASIC2.54□□□□□ -2
CLOCKO15516 RPPH1-2P-201ENST00000516688 293 ntBASIC2.54□□□□□ -2
CLOCKO15516 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.54□□□□□ -2
CLOCKO15516 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.54□□□□□ -2
CLOCKO15516 COX6CP8-201ENST00000522620 226 ntBASIC2.54□□□□□ -2
CLOCKO15516 LRRC6P1-201ENST00000532188 885 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.54□□□□□ -2
CLOCKO15516 AL132857.1-201ENST00000555180 708 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC068135.2-201ENST00000569293 1028 ntBASIC2.54□□□□□ -2
CLOCKO15516 MIR4513-201ENST00000581077 86 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC006023.1-201ENST00000603944 259 ntBASIC2.54□□□□□ -2
CLOCKO15516 AL035413.2-201ENST00000604801 525 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC008277.2-201ENST00000605196 797 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC112220.2-201ENST00000605513 533 ntBASIC2.54□□□□□ -2
CLOCKO15516 AL158211.4-201ENST00000606988 584 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC011890.2-201ENST00000613393 294 ntBASIC2.54□□□□□ -2
CLOCKO15516 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.54□□□□□ -2
CLOCKO15516 OR4G2P-202ENST00000641004 1759 ntBASIC2.54□□□□□ -2
CLOCKO15516 AC007785.2-201ENST00000598627 1916 ntBASIC2.53□□□□□ -2
CLOCKO15516 OR5J1P-201ENST00000313544 939 ntBASIC2.53□□□□□ -2
CLOCKO15516 RNU4-51P-201ENST00000364206 140 ntBASIC2.53□□□□□ -2
CLOCKO15516 RNU6-1180P-201ENST00000364935 107 ntBASIC2.53□□□□□ -2
CLOCKO15516 Y_RNA.408-201ENST00000383987 102 ntBASIC2.53□□□□□ -2
CLOCKO15516 Y_RNA.548-201ENST00000384656 105 ntBASIC2.53□□□□□ -2
CLOCKO15516 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLOCKO15516 SNORA40.4-201ENST00000390971 128 ntBASIC2.53□□□□□ -2
CLOCKO15516 UBE2V1P2-201ENST00000397758 440 ntBASIC2.53□□□□□ -2
CLOCKO15516 AL356057.2-201ENST00000403318 432 ntBASIC2.53□□□□□ -2
CLOCKO15516 RNU6-193P-201ENST00000410977 107 ntBASIC2.53□□□□□ -2
CLOCKO15516 Z75741.2-201ENST00000417272 1167 ntBASIC2.53□□□□□ -2
CLOCKO15516 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC2.53□□□□□ -2
CLOCKO15516 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLOCKO15516 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.53□□□□□ -2
CLOCKO15516 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.53□□□□□ -2
CLOCKO15516 MTND2P24-201ENST00000453434 806 ntBASIC2.53□□□□□ -2
CLOCKO15516 SNORD121B-201ENST00000458838 81 ntBASIC2.53□□□□□ -2
CLOCKO15516 AC004924.1-201ENST00000480160 781 ntBASIC2.53□□□□□ -2
CLOCKO15516 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.53□□□□□ -2
CLOCKO15516 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.53□□□□□ -2
CLOCKO15516 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.53□□□□□ -2
CLOCKO15516 AC117522.3-201ENST00000507974 584 ntBASIC2.53□□□□□ -2
CLOCKO15516 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.53□□□□□ -2
CLOCKO15516 XKRY-201ENST00000510392 1100 ntBASIC2.53□□□□□ -2
CLOCKO15516 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.53□□□□□ -2
CLOCKO15516 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.53□□□□□ -2
CLOCKO15516 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.53□□□□□ -2
CLOCKO15516 ELOCP29-201ENST00000588193 334 ntBASIC2.53□□□□□ -2
CLOCKO15516 OR2AS2P-201ENST00000606902 342 ntBASIC2.53□□□□□ -2
CLOCKO15516 AC140725.3-201ENST00000616193 880 ntBASIC2.53□□□□□ -2
CLOCKO15516 AL445264.1-201ENST00000621719 171 ntBASIC2.53□□□□□ -2
CLOCKO15516 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
CLOCKO15516 OR1S1-201ENST00000624470 978 ntBASIC2.53□□□□□ -2
CLOCKO15516 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.53□□□□□ -2
CLOCKO15516 MIR4275-201ENST00000636486 87 ntBASIC2.53□□□□□ -2
CLOCKO15516 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
CLOCKO15516 AL079343.1-201ENST00000572358 1771 ntBASIC2.53□□□□□ -2
CLOCKO15516 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
CLOCKO15516 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLOCKO15516 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
CLOCKO15516 RNU5E-8P-201ENST00000363502 116 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 Y_RNA.234-201ENST00000364409 97 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 RNU6-298P-201ENST00000390888 96 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.52□□□□□ -2.01
CLOCKO15516 AC099548.1-201ENST00000421443 426 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 OR4K11P-201ENST00000431829 904 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC087499.2-201ENST00000432861 149 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.52□□□□□ -2.01
CLOCKO15516 BMI1P1-201ENST00000445879 941 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.52□□□□□ -2.01
CLOCKO15516 RNU7-136P-201ENST00000458819 69 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CLOCKO15516 RPL37P25-201ENST00000507308 276 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC093752.1-206ENST00000511823 336 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 OR5BM1P-201ENST00000512021 366 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.52□□□□□ -2.01
CLOCKO15516 RNA5SP356-201ENST00000515972 94 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.52□□□□□ -2.01
CLOCKO15516 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.52□□□□□ -2.01
CLOCKO15516 AC104072.1-201ENST00000568817 668 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC010546.1-201ENST00000569391 485 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.52□□□□□ -2.01
CLOCKO15516 VN1R90P-201ENST00000595717 726 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AL136363.1-201ENST00000605349 337 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AC103798.2-201ENST00000624292 632 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 AL159972.1-201ENST00000625150 448 ntBASIC2.52□□□□□ -2.01
CLOCKO15516 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.52□□□□□ -2.01
CLOCKO15516 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
CLOCKO15516 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
CLOCKO15516 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLOCKO15516 AL022578.1-201ENST00000439330 1433 ntBASIC2.51□□□□□ -2.01
CLOCKO15516 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.51□□□□□ -2.01
CLOCKO15516 AL672167.1-206ENST00000356293 943 ntBASIC2.51□□□□□ -2.01
CLOCKO15516 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
CLOCKO15516 SNORA18.3-201ENST00000384122 132 ntBASIC2.51□□□□□ -2.01
CLOCKO15516 MIR627-201ENST00000384979 97 ntBASIC2.51□□□□□ -2.01
CLOCKO15516 SNORA40.2-201ENST00000390847 128 ntBASIC2.51□□□□□ -2.01
CLOCKO15516 RNA5SP210-201ENST00000391034 120 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms