Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.24□□□□□ -2.05
CHD1O14646 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.24□□□□□ -2.05
CHD1O14646 AC021146.8-201ENST00000507455 733 ntBASIC2.24□□□□□ -2.05
CHD1O14646 RNU6-405P-201ENST00000516637 110 ntBASIC2.24□□□□□ -2.05
CHD1O14646 RNU6-467P-201ENST00000517027 110 ntBASIC2.24□□□□□ -2.05
CHD1O14646 AP000560.1-201ENST00000624150 1937 ntBASIC2.24□□□□□ -2.05
CHD1O14646 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CHD1O14646 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CHD1O14646 RNU1-133P-201ENST00000364867 167 ntBASIC2.23□□□□□ -2.05
CHD1O14646 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.23□□□□□ -2.05
CHD1O14646 MTATP6P22-201ENST00000507369 598 ntBASIC2.23□□□□□ -2.05
CHD1O14646 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.23□□□□□ -2.05
CHD1O14646 MIR5194-201ENST00000582634 120 ntBASIC2.23□□□□□ -2.05
CHD1O14646 AC068944.2-201ENST00000610373 403 ntBASIC2.23□□□□□ -2.05
CHD1O14646 DUXAP9-208ENST00000622815 614 ntBASIC2.23□□□□□ -2.05
CHD1O14646 PABPC1P7-201ENST00000413177 1513 ntBASIC2.23□□□□□ -2.05
CHD1O14646 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CHD1O14646 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
CHD1O14646 MIR153-1-201ENST00000384914 90 ntBASIC2.22□□□□□ -2.05
CHD1O14646 RNU1-139P-201ENST00000391307 165 ntBASIC2.22□□□□□ -2.05
CHD1O14646 AL356057.2-201ENST00000403318 432 ntBASIC2.22□□□□□ -2.05
CHD1O14646 RNU2-25P-201ENST00000411041 191 ntBASIC2.22□□□□□ -2.05
CHD1O14646 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD1O14646 MTCYBP45-201ENST00000435243 565 ntBASIC2.22□□□□□ -2.05
CHD1O14646 ZNF734P-201ENST00000419494 1534 ntBASIC2.22□□□□□ -2.05
CHD1O14646 SNORA67.1-201ENST00000364749 141 ntBASIC2.22□□□□□ -2.05
CHD1O14646 MIR144-201ENST00000384886 86 ntBASIC2.22□□□□□ -2.05
CHD1O14646 AL031659.1-201ENST00000447075 539 ntBASIC2.22□□□□□ -2.05
CHD1O14646 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD1O14646 RPS29P20-201ENST00000489592 171 ntBASIC2.22□□□□□ -2.05
CHD1O14646 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.22□□□□□ -2.05
CHD1O14646 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.22□□□□□ -2.05
CHD1O14646 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
CHD1O14646 MIR607-201ENST00000385241 96 ntBASIC2.21□□□□□ -2.06
CHD1O14646 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHD1O14646 TRIM60P13-201ENST00000432350 1283 ntBASIC2.21□□□□□ -2.06
CHD1O14646 MTND1P18-201ENST00000448191 573 ntBASIC2.21□□□□□ -2.06
CHD1O14646 RFC5P1-201ENST00000454419 874 ntBASIC2.21□□□□□ -2.06
CHD1O14646 AC146507.1-201ENST00000468335 354 ntBASIC2.21□□□□□ -2.06
CHD1O14646 AC010627.1-201ENST00000503819 1294 ntBASIC2.21□□□□□ -2.06
CHD1O14646 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.21□□□□□ -2.06
CHD1O14646 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CHD1O14646 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.21□□□□□ -2.06
CHD1O14646 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC2.21□□□□□ -2.06
CHD1O14646 AC145207.9-201ENST00000623802 325 ntBASIC2.21□□□□□ -2.06
CHD1O14646 AP000676.4-201ENST00000624659 623 ntBASIC2.21□□□□□ -2.06
CHD1O14646 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CHD1O14646 MIR222-201ENST00000384992 110 ntBASIC2.2□□□□□ -2.06
CHD1O14646 AL033519.2-201ENST00000403958 392 ntBASIC2.2□□□□□ -2.06
CHD1O14646 PSMA2P3-201ENST00000429685 675 ntBASIC2.2□□□□□ -2.06
CHD1O14646 ARL5AP3-201ENST00000439327 386 ntBASIC2.2□□□□□ -2.06
CHD1O14646 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHD1O14646 RNU1-61P-201ENST00000516107 151 ntBASIC2.2□□□□□ -2.06
CHD1O14646 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.2□□□□□ -2.06
CHD1O14646 AP000907.2-201ENST00000530827 353 ntBASIC2.2□□□□□ -2.06
CHD1O14646 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.2□□□□□ -2.06
CHD1O14646 LLPHP1-201ENST00000603571 367 ntBASIC2.2□□□□□ -2.06
CHD1O14646 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHD1O14646 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CHD1O14646 RNA5SP363-201ENST00000365072 115 ntBASIC2.2□□□□□ -2.06
CHD1O14646 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHD1O14646 HMGB3P2-201ENST00000411913 584 ntBASIC2.2□□□□□ -2.06
CHD1O14646 Z85995.1-201ENST00000415547 335 ntBASIC2.2□□□□□ -2.06
CHD1O14646 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.2□□□□□ -2.06
CHD1O14646 RPL35AP22-201ENST00000436855 335 ntBASIC2.2□□□□□ -2.06
CHD1O14646 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CHD1O14646 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.2□□□□□ -2.06
CHD1O14646 ARL2BPP4-201ENST00000506854 471 ntBASIC2.2□□□□□ -2.06
CHD1O14646 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.2□□□□□ -2.06
CHD1O14646 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.2□□□□□ -2.06
CHD1O14646 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHD1O14646 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
CHD1O14646 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CHD1O14646 MIR625-201ENST00000385047 85 ntBASIC2.19□□□□□ -2.06
CHD1O14646 HMGN1P33-201ENST00000432945 451 ntBASIC2.19□□□□□ -2.06
CHD1O14646 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
CHD1O14646 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.19□□□□□ -2.06
CHD1O14646 RN7SL793P-201ENST00000583259 296 ntBASIC2.19□□□□□ -2.06
CHD1O14646 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.19□□□□□ -2.06
CHD1O14646 AC012640.5-201ENST00000623897 319 ntBASIC2.19□□□□□ -2.06
CHD1O14646 ZNF33CP-201ENST00000432492 2030 ntBASIC2.19□□□□□ -2.06
CHD1O14646 RN7SKP265-201ENST00000516448 223 ntBASIC2.18□□□□□ -2.06
CHD1O14646 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.18□□□□□ -2.06
CHD1O14646 AC087373.1-201ENST00000524920 491 ntBASIC2.18□□□□□ -2.06
CHD1O14646 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.18□□□□□ -2.06
CHD1O14646 AC084364.2-201ENST00000546924 395 ntBASIC2.18□□□□□ -2.06
CHD1O14646 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.18□□□□□ -2.06
CHD1O14646 AC125611.2-201ENST00000551907 647 ntBASIC2.18□□□□□ -2.06
CHD1O14646 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.18□□□□□ -2.06
CHD1O14646 AL121821.2-201ENST00000556081 394 ntBASIC2.18□□□□□ -2.06
CHD1O14646 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.18□□□□□ -2.06
CHD1O14646 AL161722.3-201ENST00000605789 2983 ntBASIC2.18□□□□□ -2.06
CHD1O14646 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHD1O14646 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.17□□□□□ -2.06
CHD1O14646 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.17□□□□□ -2.06
CHD1O14646 SNRPGP13-201ENST00000442212 177 ntBASIC2.17□□□□□ -2.06
CHD1O14646 AL353898.1-201ENST00000444055 238 ntBASIC2.17□□□□□ -2.06
CHD1O14646 SNRPFP3-201ENST00000457792 225 ntBASIC2.17□□□□□ -2.06
CHD1O14646 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.17□□□□□ -2.06
CHD1O14646 SNORD84-203ENST00000584275 78 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms