Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AP002404.1-201ENST00000532005 451 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 HMGB1P14-201ENST00000557424 591 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 LARP7P3-201ENST00000579888 337 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 MIR4999-201ENST00000585029 91 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 AC079089.3-201ENST00000603094 673 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 AL357094.1-201ENST00000603845 844 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 AC093424.1-201ENST00000604999 338 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 AC103710.4-201ENST00000609301 899 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 uc_338.25-201ENST00000613756 156 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 AC021755.4-201ENST00000616620 456 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 AC099506.2-201ENST00000623074 221 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 SDAD1P2-201ENST00000441308 2028 ntBASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPIPA2E9PIF3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC092447.10-201ENST00000620607 1652 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RNU5E-8P-201ENST00000363502 116 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 U3.11-201ENST00000364476 212 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 TPMTP3-201ENST00000411928 735 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RPL35AP12-201ENST00000425362 338 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL445669.1-201ENST00000426743 755 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 NANOGNBP1-201ENST00000448444 480 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 MTND1P9-201ENST00000453775 944 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 SNORA59A-201ENST00000459326 152 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RN7SL442P-201ENST00000473804 320 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RPS3AP14-201ENST00000483907 780 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC011825.1-201ENST00000484967 388 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL049874.1-201ENST00000489560 388 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC093809.1-201ENST00000509155 340 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RNA5SP216-201ENST00000516111 123 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 RN7SKP287-201ENST00000516546 266 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC009812.2-201ENST00000517657 457 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 OR5G4P-201ENST00000525251 760 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AP000867.2-201ENST00000532468 320 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 ELOCP32-201ENST00000548625 324 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 SETP2-201ENST00000553886 926 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 MTATP6P24-201ENST00000576835 677 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 BNIP3P23-201ENST00000599655 511 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 DUXAP4-201ENST00000603046 613 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 PRELID3BP8-201ENST00000604148 295 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC072039.2-201ENST00000608883 439 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC090132.2-201ENST00000615881 347 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL159972.1-201ENST00000625150 448 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AC091564.4-201ENST00000533934 2194 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NPIPA2E9PIF3 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 RNU1-140P-201ENST00000365040 165 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 RNU6-637P-201ENST00000384050 107 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 TAAR7P-201ENST00000436141 242 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 UBE2V1P13-201ENST00000436983 439 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 AC009237.8-201ENST00000445492 379 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 SNRPGP6-201ENST00000451124 220 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 ELOCP23-201ENST00000452014 332 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 AC010099.1-201ENST00000455434 375 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 OR6K1P-201ENST00000456766 971 ntBASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.84□□□□□ -1.95
NPIPA2E9PIF3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms