Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 LARP1BP2-201ENST00000486594 519 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC113347.3-201ENST00000509113 148 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC093752.1-206ENST00000511823 336 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC006499.2-201ENST00000513470 337 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 RNU6-714P-201ENST00000516963 103 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL132857.1-201ENST00000555180 708 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL132657.2-201ENST00000564417 358 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC090616.3-201ENST00000582184 217 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 TPMTP1-201ENST00000592307 737 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC024560.3-201ENST00000608482 349 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC104237.2-201ENST00000612456 443 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL603758.1-201ENST00000618654 241 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC244100.1-202ENST00000621554 382 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL445264.1-201ENST00000621719 171 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC231657.1-201ENST00000624313 397 ntBASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CLN6Q9NWW5 AC135776.4-201ENST00000624300 1904 ntBASIC2.34□□□□□ -2.04
CLN6Q9NWW5 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.34□□□□□ -2.04
CLN6Q9NWW5 CR848007.1-201ENST00000442354 1699 ntBASIC2.34□□□□□ -2.04
CLN6Q9NWW5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 RNU4-51P-201ENST00000364206 140 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 RNU6-1078P-201ENST00000364522 103 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 RNU1-140P-201ENST00000365040 165 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 SNORA18.3-201ENST00000384122 132 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 SNORA40.2-201ENST00000390847 128 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 RNU6-298P-201ENST00000390888 96 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 UBA52P6-201ENST00000399822 382 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 CR769767.1-201ENST00000436337 346 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AP000949.1-201ENST00000438328 629 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 MTCYBP3-201ENST00000445588 1137 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 WASF1P1-201ENST00000447560 1131 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 RPS15AP27-201ENST00000449183 343 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 HIGD1AP13-201ENST00000509878 289 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 RNA5SP341-201ENST00000516261 117 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC005832.3-201ENST00000537929 631 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 OR6C7P-201ENST00000547875 934 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 RPL23AP84-201ENST00000571193 464 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 DUXAP3-201ENST00000603616 594 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC024060.1-201ENST00000607052 494 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC245517.5-201ENST00000611529 162 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 SNHG22-203ENST00000617833 660 ntBASIC2.33□□□□□ -2.04
CLN6Q9NWW5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.33□□□□□ -2.04
CLN6Q9NWW5 AC022336.2-201ENST00000568966 2538 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNU6-97P-201ENST00000363387 104 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNU1-112P-201ENST00000364401 164 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNU6-343P-201ENST00000364709 104 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNU6-741P-201ENST00000383889 107 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNU6-952P-201ENST00000391164 108 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AL162578.1-201ENST00000406202 378 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 HMGN2P35-201ENST00000412164 270 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RPLP0P7-201ENST00000416050 667 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 Z82210.1-201ENST00000440037 231 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AL049734.2-201ENST00000441066 616 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 CBWD4P-201ENST00000445695 655 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AL671855.1-201ENST00000446875 1203 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 SNORD121B-201ENST00000458838 81 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNY4P37-201ENST00000516225 96 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 RNA5SP282-201ENST00000516355 108 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC025881.1-201ENST00000518851 512 ntBASIC2.32□□□□□ -2.04
CLN6Q9NWW5 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.32□□□□□ -2.04
CLN6Q9NWW5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms