Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL021997.2-201ENST00000615674 271 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 CR392039.5-201ENST00000623201 510 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC012442.3-202ENST00000636742 206 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC015813.6-201ENST00000624409 5808 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 AC074029.4-201ENST00000624796 1859 ntBASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDLIM7Q9NR12 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 SMG1P4-204ENST00000523028 4131 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RNU6-511P-201ENST00000363496 107 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 MTCYBP4-201ENST00000401524 249 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RPS20P14-201ENST00000412545 360 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AL157831.1-201ENST00000426134 473 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 YME1L1P1-201ENST00000429435 297 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RPL23AP25-201ENST00000430973 463 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AL353691.1-201ENST00000451332 387 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AL162395.1-201ENST00000457882 422 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RNU7-66P-201ENST00000459469 62 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RPL37P6-202ENST00000464216 403 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC108022.1-201ENST00000493466 478 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RN7SL812P-201ENST00000493791 279 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC021146.2-201ENST00000504736 556 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RNU2-10P-201ENST00000516375 211 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 MIR4703-201ENST00000577728 79 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 SNORD91B-202ENST00000608459 222 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC019193.3-201ENST00000609144 554 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AC092807.2-201ENST00000609367 243 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 MTCO1P24-201ENST00000515438 1558 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 ZNF734P-201ENST00000419494 1534 ntBASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDLIM7Q9NR12 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 Y_RNA.31-201ENST00000362574 102 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 Y_RNA.378-201ENST00000365652 113 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 SNORA22B-201ENST00000383876 138 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 Y_RNA.395-201ENST00000383945 109 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 RNU6-639P-201ENST00000384074 107 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC068533.1-201ENST00000418542 415 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 ARL5AP1-201ENST00000418991 388 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 COX6B1P7-201ENST00000430845 235 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC107399.1-201ENST00000451226 265 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 SNORD121B-201ENST00000458838 81 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 RPL35AP15-201ENST00000468042 339 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 RNA5SP519-201ENST00000516480 119 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 RNU6-1088P-201ENST00000516850 104 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 RNU6-798P-201ENST00000516912 103 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 APOOP3-201ENST00000536787 586 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 uc_338.34-201ENST00000617467 174 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 U73479.1-201ENST00000618062 168 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AL136313.1-201ENST00000624804 202 ntBASIC4.81□□□□□ -1.64
PDLIM7Q9NR12 AC138305.3-201ENST00000624988 240 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms