Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 MYL8P-204ENST00000431574 518 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 SDCBPP1-201ENST00000440192 890 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 RNU6-717P-201ENST00000459076 104 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 RPS29P20-201ENST00000489592 171 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 SNRPGP1-201ENST00000553864 222 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 RPS15AP11-201ENST00000594193 385 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC006539.2-201ENST00000601729 572 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC009090.3-201ENST00000616553 565 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 uc_338.20-201ENST00000621563 178 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AL031601.2-202ENST00000622650 282 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AL137003.2-201ENST00000606924 2538 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 AC009902.3-201ENST00000606235 2172 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 MTCO1P9-201ENST00000505577 1534 ntBASIC2.22□□□□□ -2.05
VCX3AQ9NNX9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC126755.2-208ENST00000327792 462 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC138969.1-213ENST00000331436 462 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 FTLP6-201ENST00000355274 422 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 RNU1-52P-201ENST00000384190 164 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 RNU4-72P-201ENST00000410754 173 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 BTF3P8-201ENST00000414577 526 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 IFNA11P-201ENST00000446352 526 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 NANOGNBP1-201ENST00000448444 480 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 PDSS1P2-201ENST00000449397 678 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC079776.3-201ENST00000450665 370 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 TRGVB-201ENST00000453257 471 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 RPS27P21-201ENST00000486977 252 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC026414.1-201ENST00000504046 698 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 RNU1-40P-201ENST00000516816 164 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 RNU1-97P-201ENST00000516872 164 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 SNORA31.18-201ENST00000517043 134 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 MTCO3P15-201ENST00000526563 574 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 NDUFS5P6-201ENST00000529136 295 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 GTF2IP8-201ENST00000560687 584 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC023824.2-201ENST00000566185 400 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC002550.2-201ENST00000621246 394 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC093875.1-201ENST00000623688 504 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 AC022336.2-201ENST00000568966 2538 ntBASIC2.21□□□□□ -2.06
VCX3AQ9NNX9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 RNU6-28P-201ENST00000362378 107 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 SNORA70.2-201ENST00000364506 135 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 MIR585-201ENST00000384887 94 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 RNU2-49P-201ENST00000410666 184 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC007919.1-201ENST00000429380 217 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 RPL36AP51-201ENST00000487216 318 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 RPL23AP49-201ENST00000492925 468 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 ANP32BP3-201ENST00000559213 706 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC105137.2-201ENST00000569073 466 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC009127.3-201ENST00000570531 403 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC090615.1-201ENST00000577519 154 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC011451.2-201ENST00000604303 598 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AL161729.4-201ENST00000604650 476 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 ATP1B3P1-201ENST00000605365 821 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC008498.1-201ENST00000613012 531 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC005332.6-201ENST00000613178 446 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AC245884.12-201ENST00000615364 59 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.2□□□□□ -2.06
VCX3AQ9NNX9 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms