Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC016691.1-201ENST00000441321 413 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 RNU7-182P-201ENST00000459009 62 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AP000873.1-201ENST00000463987 400 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC078785.3-201ENST00000476607 425 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 RN7SL604P-201ENST00000492589 296 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 NIPA2P2-201ENST00000496376 1083 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 FTH1P9-201ENST00000513251 355 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 RNU7-143P-201ENST00000516781 65 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC025627.2-201ENST00000576220 160 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 MIR548S-201ENST00000581352 82 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 AL589994.2-201ENST00000621124 579 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 YWHAEP7-203ENST00000622054 312 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 MTND5P17-201ENST00000418405 1603 ntBASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TRIM54Q9BYV2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 BDP1P-201ENST00000582658 1990 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC007685.1-201ENST00000329806 452 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 RNU6-188P-201ENST00000364207 107 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 SNORA62.1-201ENST00000364287 154 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 SNORA51.2-201ENST00000364595 132 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 RNA5SP189-201ENST00000364920 115 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 SNORA69-201ENST00000383895 132 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 SNORA56-201ENST00000383966 129 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 MIR607-201ENST00000385241 96 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AL591416.1-201ENST00000404015 867 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 NDUFS5P1-201ENST00000405668 289 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC016397.1-201ENST00000412463 242 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 RPL21P66-201ENST00000426566 466 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 HMGB1P31-201ENST00000437242 427 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 MTCO3P18-201ENST00000440206 761 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 CALM1P1-201ENST00000442082 433 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 GAPDHP27-201ENST00000447427 1020 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 DPPA3P1-201ENST00000448050 469 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC005921.1-201ENST00000510589 286 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC105417.1-201ENST00000514691 285 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 RPL23AP84-201ENST00000571193 464 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AP001330.4-201ENST00000604350 154 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 ARF4P1-201ENST00000605447 541 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC130324.3-201ENST00000614165 542 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 AL354950.2-201ENST00000617939 290 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 C2orf27A-204ENST00000623058 969 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 U6.114-201ENST00000636407 96 ntBASIC4□□□□□ -1.77
TRIM54Q9BYV2 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4□□□□□ -1.77
TRIM54Q9BYV2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4□□□□□ -1.77
TRIM54Q9BYV2 AL137003.2-201ENST00000606924 2538 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC106871.1-201ENST00000568324 3102 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 RNU6-701P-201ENST00000384059 107 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 SNRPEP10-201ENST00000420249 274 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 AL139413.1-201ENST00000421309 217 ntBASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
TRIM54Q9BYV2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms