Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 Y_RNA.510-201ENST00000384511 114 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NPAS2Q99743 RNU6-952P-201ENST00000391164 108 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.74□□□□□ -1.97
NPAS2Q99743 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
NPAS2Q99743 AL365496.1-201ENST00000426885 215 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 USP9YP11-201ENST00000427537 717 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.74□□□□□ -1.97
NPAS2Q99743 AL358794.1-201ENST00000445689 381 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 MRPL50P4-201ENST00000446432 475 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.74□□□□□ -1.97
NPAS2Q99743 MTND1P9-201ENST00000453775 944 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 BX322784.1-201ENST00000455793 1077 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC003982.1-202ENST00000469928 248 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 UBE2DNL-203ENST00000474922 222 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AL049874.1-201ENST00000489560 388 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.74□□□□□ -1.97
NPAS2Q99743 AC096571.1-202ENST00000506634 735 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.74□□□□□ -1.97
NPAS2Q99743 RNU6-1256P-201ENST00000516539 103 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC091163.3-201ENST00000518269 1144 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 COX6CP8-201ENST00000522620 226 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.74□□□□□ -1.97
NPAS2Q99743 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.74□□□□□ -1.97
NPAS2Q99743 MTCO3P13-201ENST00000577757 781 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.74□□□□□ -1.97
NPAS2Q99743 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.74□□□□□ -1.97
NPAS2Q99743 AC008739.2-201ENST00000597006 317 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC078899.3-201ENST00000599065 212 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC010620.2-201ENST00000600135 313 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC019159.1-201ENST00000605094 187 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.74□□□□□ -1.97
NPAS2Q99743 PART1_2.1-201ENST00000612397 250 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC004852.3-201ENST00000614131 326 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC002064.3-201ENST00000623448 346 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC231657.1-201ENST00000624313 397 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 AC099654.9-201ENST00000637055 678 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.74□□□□□ -1.97
NPAS2Q99743 LINC02211-204ENST00000642024 1070 ntBASIC2.74□□□□□ -1.97
NPAS2Q99743 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.74□□□□□ -1.97
NPAS2Q99743 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NPAS2Q99743 Z82195.2-201ENST00000612348 18351 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPAS2Q99743 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NPAS2Q99743 AL161781.1-201ENST00000354277 403 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 RNU6-560P-201ENST00000364007 108 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 Y_RNA.548-201ENST00000384656 105 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 SNORA26.7-201ENST00000391288 122 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS2Q99743 AC022018.1-201ENST00000430685 241 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 ARPC3P1-201ENST00000437218 533 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 RPL23AP76-201ENST00000441860 458 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 Z96811.1-201ENST00000445880 108 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS2Q99743 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS2Q99743 TTC39CP1-201ENST00000512513 755 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AC008837.2-201ENST00000513076 418 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 MTATP6P9-201ENST00000515039 680 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 RNU6-928P-201ENST00000516876 104 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS2Q99743 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.73□□□□□ -1.97
NPAS2Q99743 OR6C7P-201ENST00000547875 934 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.73□□□□□ -1.97
NPAS2Q99743 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS2Q99743 AC010653.1-201ENST00000571108 881 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.73□□□□□ -1.97
NPAS2Q99743 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
NPAS2Q99743 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.73□□□□□ -1.97
NPAS2Q99743 BBIP1P1-201ENST00000602999 279 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AC144521.1-201ENST00000607148 956 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.73□□□□□ -1.97
NPAS2Q99743 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AL391262.2-201ENST00000622466 494 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 AC073308.1-201ENST00000623696 305 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 OR4G2P-202ENST00000641004 1759 ntBASIC2.73□□□□□ -1.97
NPAS2Q99743 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
NPAS2Q99743 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.72□□□□□ -1.97
NPAS2Q99743 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AC007785.2-201ENST00000598627 1916 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 RNU1-105P-201ENST00000363470 161 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 RNU5E-8P-201ENST00000363502 116 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 RNU5E-10P-201ENST00000363506 118 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
NPAS2Q99743 SNORD21-201ENST00000383953 95 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 SNORA18.3-201ENST00000384122 132 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 MIR887-201ENST00000401258 79 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.72□□□□□ -1.97
NPAS2Q99743 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.72□□□□□ -1.97
NPAS2Q99743 RPL36AP6-201ENST00000435770 321 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AL714022.1-201ENST00000439897 151 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 BMI1P1-201ENST00000445879 941 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AC002381.1-201ENST00000447049 280 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 MTND2P24-201ENST00000453434 806 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.72□□□□□ -1.97
NPAS2Q99743 RNU7-23P-201ENST00000459465 62 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 AC116337.2-201ENST00000477662 156 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 FAM172BP-201ENST00000487497 1089 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 RPL21P131-201ENST00000497298 483 ntBASIC2.72□□□□□ -1.97
NPAS2Q99743 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.72□□□□□ -1.97
NPAS2Q99743 RNY4P37-201ENST00000516225 96 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms