Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.14□□□□□ -2.23
CSMD1Q96PZ7 AC007390.1-201ENST00000415722 356 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AIMP1P2-201ENST00000425294 312 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 VN1R96P-201ENST00000446052 858 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC023790.1-201ENST00000482174 347 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 MKKS-204ENST00000639674 192 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 MTND5P9-201ENST00000503854 1755 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 SNORA62.2-201ENST00000364672 152 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 RNU2-22P-201ENST00000411266 212 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 MRPS36P1-201ENST00000421291 307 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC004022.1-201ENST00000447766 1066 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 MTCYBP35-201ENST00000503630 1137 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 CUL4AP1-201ENST00000514750 1863 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC013470.3-201ENST00000420252 1194 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC025755.1-201ENST00000521306 278 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC139103.1-201ENST00000534696 1030 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AL121917.1-203ENST00000605534 577 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 DUXAP9-208ENST00000622815 614 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
CSMD1Q96PZ7 AC111188.2-201ENST00000529697 1387 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 USP9YP33-201ENST00000412220 421 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 HMGN2P38-201ENST00000423806 265 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 USP9YP35-201ENST00000435696 412 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 HAUS1P1-201ENST00000505275 832 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AL590095.2-201ENST00000604136 117 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 uc_338.12-201ENST00000616344 181 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 RNA5SP239-201ENST00000410218 129 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC004854.1-201ENST00000440356 349 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 RNU1-92P-201ENST00000517017 135 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 DUXAP5-201ENST00000529668 529 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 DUXAP11-201ENST00000603858 526 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 SNRPFP3-201ENST00000457792 225 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC092902.1-201ENST00000486999 259 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC006483.1-201ENST00000487308 313 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC013553.2-201ENST00000604244 589 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC016590.3-201ENST00000611171 753 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC007256.1-201ENST00000392253 2765 ntBASIC1.12□□□□□ -2.23
CSMD1Q96PZ7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 U8.1-201ENST00000362843 134 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AL109653.1-201ENST00000603091 248 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 XIAPP3-201ENST00000312918 795 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AP003033.1-201ENST00000527244 415 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AC010928.2-201ENST00000588017 287 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AL159169.2-201ENST00000610061 1269 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 MTND4P12-201ENST00000498999 1377 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 NDUFS5P3-201ENST00000450668 321 ntBASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.11□□□□□ -2.23
CSMD1Q96PZ7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 RNU1-78P-201ENST00000391248 165 ntBASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 CST2P1-201ENST00000425770 87 ntBASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 OR51B8P-201ENST00000449892 769 ntBASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AC005498.1-201ENST00000592125 465 ntBASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AL354685.2-201ENST00000448218 1447 ntBASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AP003497.1-201ENST00000528472 562 ntBASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 AC097468.3-201ENST00000607956 456 ntBASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CSMD1Q96PZ7 MIR409-201ENST00000362237 79 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 MIR758-201ENST00000390227 88 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 HMGN1P14-201ENST00000412459 517 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 ARL5AP3-201ENST00000439327 386 ntBASIC1.09□□□□□ -2.23
CSMD1Q96PZ7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms