Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 UBE2CP3-201ENST00000502715 450 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 SLC25A15P5-201ENST00000508033 253 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 SCARNA24.1-201ENST00000516465 137 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
CCDC138Q96M89 AP006587.4-201ENST00000526053 529 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AC022880.1-201ENST00000534017 973 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.95□□□□□ -1.78
CCDC138Q96M89 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
CCDC138Q96M89 DPPA3P3-201ENST00000603842 430 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AL591034.3-201ENST00000605511 685 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.95□□□□□ -1.78
CCDC138Q96M89 AC009570.1-201ENST00000609599 745 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AC128687.2-201ENST00000609657 566 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AC122108.2-201ENST00000611946 526 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AL359740.1-201ENST00000624340 592 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 AC118273.1-201ENST00000525324 3006 ntBASIC3.95□□□□□ -1.78
CCDC138Q96M89 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.95□□□□□ -1.78
CCDC138Q96M89 BDP1P-201ENST00000582658 1990 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AP001148.1-201ENST00000624124 2359 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC138Q96M89 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNA5SP295-201ENST00000362655 121 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNU6-1097P-201ENST00000363586 107 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNA5SP130-201ENST00000364431 114 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNU6-108P-201ENST00000365558 107 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 FAT1P1-201ENST00000406588 507 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNA5SP317-201ENST00000410176 116 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNA5SP311-201ENST00000411290 116 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC091390.3-201ENST00000426478 338 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC104651.1-201ENST00000427559 735 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 MTCO2P11-201ENST00000431069 680 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 OR4C10P-201ENST00000434991 931 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 MTND1P34-201ENST00000438556 671 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 NANOGNBP1-201ENST00000448444 480 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 NUTF2P7-201ENST00000453086 375 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNA5SP310-201ENST00000459084 116 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 RPS20P22-201ENST00000473700 357 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC023194.1-201ENST00000493084 308 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC107401.1-201ENST00000503426 685 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RPL37P25-201ENST00000507308 276 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC108078.1-201ENST00000508073 725 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNA5SP315-201ENST00000516340 116 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNU6-720P-201ENST00000516363 108 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNU6-352P-201ENST00000516908 107 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNU6-410P-201ENST00000517006 107 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 RNA5SP312-201ENST00000517068 116 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 IGKV2-23-201ENST00000518729 323 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 OR5G4P-201ENST00000525251 760 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 ATP5F1P5-201ENST00000526403 760 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC022690.1-201ENST00000526681 550 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC098848.2-201ENST00000588023 330 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 MIR6867-201ENST00000610636 67 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AL589994.2-201ENST00000621124 579 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AC007998.5-201ENST00000622938 237 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AL773545.4-201ENST00000637262 310 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 AL513478.4-201ENST00000641636 310 ntBASIC3.94□□□□□ -1.78
CCDC138Q96M89 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.94□□□□□ -1.78
CCDC138Q96M89 OTUD4P1-201ENST00000237841 3067 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC138Q96M89 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC138Q96M89 RPS26P8-201ENST00000393490 348 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 RNU2-39P-201ENST00000410604 198 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 Z85995.1-201ENST00000415547 335 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 SNRPEP4-201ENST00000435815 279 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 NEFMP1-201ENST00000443423 1006 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 RNU7-170P-201ENST00000459303 61 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 AC087588.1-201ENST00000462203 316 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 AC007182.2-201ENST00000489251 402 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 HMGB1P29-201ENST00000505659 499 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 TTC39CP1-201ENST00000512513 755 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 AC010342.1-201ENST00000514047 877 ntBASIC3.93□□□□□ -1.78
CCDC138Q96M89 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC138Q96M89 RNA5SP291-201ENST00000517222 105 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms