Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 RN7SL807P-201ENST00000470923 297 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 RPS3AP43-201ENST00000479743 781 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC103975.1-201ENST00000482506 483 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AIG1P1-201ENST00000503376 148 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC010625.1-201ENST00000511296 403 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 RAC1P5-201ENST00000512182 576 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC026407.1-201ENST00000518369 204 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LINC00477Q96M19 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC135628.1-201ENST00000568867 534 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 UBE2L4-201ENST00000587688 464 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC008751.2-201ENST00000597885 980 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 RPL12P50-201ENST00000603116 116 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 HSPE1P7-201ENST00000604681 321 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC004853.1-201ENST00000604902 698 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AL592221.1-201ENST00000605266 382 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 MIR7975-201ENST00000619350 68 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AL158801.5-201ENST00000623123 465 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC068880.5-201ENST00000624331 290 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 AC079228.1-201ENST00000624774 1049 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 U6.105-201ENST00000637379 88 ntBASIC2.2□□□□□ -2.06
LINC00477Q96M19 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
LINC00477Q96M19 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
LINC00477Q96M19 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC00477Q96M19 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC00477Q96M19 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC104454.1-201ENST00000421341 1401 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC00477Q96M19 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
LINC00477Q96M19 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LINC00477Q96M19 Y_RNA.234-201ENST00000364409 97 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 SNORA9.2-201ENST00000365361 133 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 MIR512-1-201ENST00000384913 84 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 MIR183-201ENST00000384958 110 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL031679.1-201ENST00000400616 525 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL356057.2-201ENST00000403318 432 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL022400.1-201ENST00000423946 935 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 RPL27AP8-201ENST00000424277 446 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC092017.2-201ENST00000427600 362 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC005326.1-201ENST00000429197 123 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 YME1L1P1-201ENST00000429435 297 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL008629.1-201ENST00000438615 184 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL445567.1-201ENST00000439121 144 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL591503.2-201ENST00000442314 1005 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 MTND5P2-201ENST00000442927 1142 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 OR6K5P-201ENST00000447050 945 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 PRDX3P3-201ENST00000447765 522 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 ART2BP-201ENST00000453501 499 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 RNU7-125P-201ENST00000458760 62 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC002456.2-201ENST00000509356 380 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 COX6CP8-201ENST00000522620 226 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC022861.1-201ENST00000522981 663 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 OR5G4P-201ENST00000525251 760 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC109446.2-201ENST00000567872 497 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 MIR1254-2-201ENST00000579553 63 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC008739.2-201ENST00000597006 317 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC008739.3-201ENST00000603262 127 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC008147.4-201ENST00000617570 1204 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC110079.1-202ENST00000635213 138 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 MIR6733-201ENST00000635723 61 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 FO624990.1-201ENST00000636373 85 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC103706.2-201ENST00000638080 240 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 AC010680.1-201ENST00000590024 3590 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
LINC00477Q96M19 AL390862.1-201ENST00000635467 1469 ntBASIC2.19□□□□□ -2.06
LINC00477Q96M19 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LINC00477Q96M19 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 AL672167.1-206ENST00000356293 943 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 Y_RNA.169-201ENST00000363745 96 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 RNA5SP72-201ENST00000364442 117 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
LINC00477Q96M19 RNA5SP120-201ENST00000410900 112 ntBASIC2.18□□□□□ -2.06
LINC00477Q96M19 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.18□□□□□ -2.06
LINC00477Q96M19 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms