Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
VPS50Q96JG6 AC093010.3-201ENST00000570269 15214 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AL645937.1-201ENST00000641739 1652 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS50Q96JG6 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS50Q96JG6 Y_RNA.88-201ENST00000363029 99 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RNU6-1155P-201ENST00000363554 107 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
VPS50Q96JG6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 RNU1-39P-201ENST00000383897 165 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RNU6-637P-201ENST00000384050 107 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RNU6-629P-201ENST00000384061 103 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS50Q96JG6 RPS4XP8-201ENST00000402039 771 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AL356095.1-201ENST00000417217 199 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 USP9YP27-201ENST00000418455 438 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RPL7P2-201ENST00000427639 268 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 HMGB1P31-201ENST00000437242 427 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RPL7P54-201ENST00000438336 674 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC093156.1-201ENST00000440382 670 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 WASF1P1-201ENST00000447560 1131 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC006480.1-201ENST00000449887 378 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC108059.3-201ENST00000456388 214 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC110792.1-201ENST00000491826 472 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC079382.1-201ENST00000493346 557 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RPL29P14-201ENST00000495837 428 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RPL31P61-201ENST00000496160 376 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 GLUD1P4-201ENST00000590914 418 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC007363.1-201ENST00000604736 620 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AP001330.5-201ENST00000607176 411 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 TUG1_1.1-201ENST00000610654 145 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 AL445363.3-201ENST00000623080 671 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 AC009161.2-201ENST00000624626 138 ntBASIC3.91□□□□□ -1.78
VPS50Q96JG6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
VPS50Q96JG6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
VPS50Q96JG6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
VPS50Q96JG6 CR848007.1-201ENST00000442354 1699 ntBASIC3.9□□□□□ -1.78
VPS50Q96JG6 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.78
VPS50Q96JG6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
VPS50Q96JG6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 Y_RNA.38-201ENST00000362617 102 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 SNORD56.2-201ENST00000363242 71 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 Y_RNA.126-201ENST00000363382 111 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 RNU6-534P-201ENST00000364877 106 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 RNU6-432P-201ENST00000384196 109 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 RNU6-278P-201ENST00000390945 109 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 HMGN2P8-201ENST00000391458 268 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 BEND7P1-201ENST00000422058 457 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 GPR143P-201ENST00000434155 205 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
VPS50Q96JG6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 FDX1P2-201ENST00000450769 375 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 RN7SL330P-201ENST00000469709 307 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 RPS15AP36-201ENST00000492022 382 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 AP003072.2-201ENST00000527756 676 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC109635.3-201ENST00000529536 185 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC104383.1-201ENST00000530297 370 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 AP003034.1-201ENST00000534621 422 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 ARL2BPP2-201ENST00000550907 489 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC125611.2-201ENST00000551907 647 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 AL157687.1-201ENST00000554853 619 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 GNRHR2P1-201ENST00000555315 631 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 MIR548S-201ENST00000581352 82 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 MIR4293-201ENST00000584305 78 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC098848.2-201ENST00000588023 330 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC006254.3-201ENST00000603353 884 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC104662.1-201ENST00000604448 511 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC093788.1-201ENST00000609356 927 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC002553.4-201ENST00000616896 331 ntBASIC3.9□□□□□ -1.79
VPS50Q96JG6 AC022306.2-201ENST00000617563 647 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms