Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNA5SP341-201ENST00000516261 117 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 RNU6-579P-201ENST00000516879 102 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 RNU6-1003P-201ENST00000517099 105 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.92□□□□□ -1.78
USP38Q8NB14 AP002453.2-201ENST00000533503 320 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.92□□□□□ -1.78
USP38Q8NB14 AC006362.1-201ENST00000567392 174 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 BNIP3P8-201ENST00000597863 560 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AL606834.2-201ENST00000602954 668 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC104763.2-201ENST00000604179 382 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC090425.2-201ENST00000608818 501 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC008250.2-201ENST00000615261 205 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.92□□□□□ -1.78
USP38Q8NB14 AL159972.1-201ENST00000625150 448 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 AC090582.1-201ENST00000636321 199 ntBASIC3.92□□□□□ -1.78
USP38Q8NB14 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
USP38Q8NB14 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
USP38Q8NB14 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.92□□□□□ -1.78
USP38Q8NB14 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.91□□□□□ -1.78
USP38Q8NB14 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USP38Q8NB14 FGF7P2-201ENST00000332473 296 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 RNU6-432P-201ENST00000384196 109 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 RPS3AP24-201ENST00000407896 734 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 HMGN1P24-201ENST00000412282 298 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.91□□□□□ -1.78
USP38Q8NB14 BX323014.1-201ENST00000412876 237 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP38Q8NB14 DUTP6-201ENST00000425573 462 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 MTCO1P39-201ENST00000426148 480 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC010153.1-201ENST00000432862 727 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC024082.2-201ENST00000434771 238 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 FTH1P1-201ENST00000437933 532 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC004866.2-201ENST00000438285 481 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.91□□□□□ -1.78
USP38Q8NB14 MTND1P9-201ENST00000453775 944 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 RNA5SP269-201ENST00000459032 137 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 Y_RNA.638-201ENST00000459374 113 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC004801.2-202ENST00000463559 283 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC023598.1-201ENST00000472521 361 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 MTND4P2-201ENST00000507767 1203 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.91□□□□□ -1.78
USP38Q8NB14 HMGN1P28-201ENST00000521340 364 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AP000873.5-201ENST00000533906 236 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP38Q8NB14 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.91□□□□□ -1.78
USP38Q8NB14 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.91□□□□□ -1.78
USP38Q8NB14 RSL24D1P11-201ENST00000591045 491 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC112191.3-201ENST00000604371 277 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.91□□□□□ -1.78
USP38Q8NB14 RMST_8.1-201ENST00000610287 165 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC025594.3-201ENST00000613068 790 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC104010.1-201ENST00000616889 150 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC012150.2-201ENST00000621300 544 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AL360181.4-201ENST00000621752 134 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 AC009268.2-201ENST00000621925 457 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.91□□□□□ -1.78
USP38Q8NB14 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.91□□□□□ -1.78
USP38Q8NB14 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
USP38Q8NB14 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.91□□□□□ -1.78
USP38Q8NB14 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
USP38Q8NB14 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
USP38Q8NB14 AC021755.1-201ENST00000559747 1447 ntBASIC3.9□□□□□ -1.78
USP38Q8NB14 SNORA5B-201ENST00000363786 132 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 MIR184-201ENST00000384962 84 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 SNORA40.3-201ENST00000390964 122 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.9□□□□□ -1.79
USP38Q8NB14 USP9YP13-201ENST00000417797 480 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.9□□□□□ -1.79
USP38Q8NB14 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.9□□□□□ -1.79
USP38Q8NB14 ST13P20-201ENST00000447996 1065 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AC055855.1-201ENST00000489563 579 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.9□□□□□ -1.79
USP38Q8NB14 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.9□□□□□ -1.79
USP38Q8NB14 AC123904.2-201ENST00000548059 300 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.9□□□□□ -1.79
USP38Q8NB14 MIR4425-201ENST00000580572 84 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.9□□□□□ -1.79
USP38Q8NB14 SEPT7P9-203ENST00000604116 343 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.9□□□□□ -1.79
USP38Q8NB14 AC121334.2-201ENST00000605387 271 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AL355472.4-201ENST00000610233 626 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AC095031.1-201ENST00000623685 672 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 AL732372.2-225ENST00000642124 456 ntBASIC3.9□□□□□ -1.79
USP38Q8NB14 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP38Q8NB14 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
USP38Q8NB14 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
USP38Q8NB14 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
USP38Q8NB14 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.89□□□□□ -1.79
USP38Q8NB14 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
USP38Q8NB14 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USP38Q8NB14 AL390237.1-201ENST00000404226 1415 ntBASIC3.89□□□□□ -1.79
USP38Q8NB14 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP38Q8NB14 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.89□□□□□ -1.79
USP38Q8NB14 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP38Q8NB14 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP38Q8NB14 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USP38Q8NB14 Y_RNA.553-201ENST00000384670 102 ntBASIC3.89□□□□□ -1.79
USP38Q8NB14 RPL7P25-201ENST00000404151 721 ntBASIC3.89□□□□□ -1.79
USP38Q8NB14 Y_RNA.608-201ENST00000410647 95 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms