Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC096533.1-201ENST00000411645 353 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 AL606495.1-201ENST00000422100 813 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS8Q8N3P4 AL031663.1-201ENST00000437445 219 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 RABEPKP1-201ENST00000440529 1026 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 PGBD4P3-201ENST00000440731 581 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS8Q8N3P4 MRPL42P6-201ENST00000486397 371 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
VPS8Q8N3P4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS8Q8N3P4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS8Q8N3P4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
VPS8Q8N3P4 RPL7P37-201ENST00000425095 738 ntBASIC2.14□□□□□ -2.07
VPS8Q8N3P4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.14□□□□□ -2.07
VPS8Q8N3P4 AC108734.3-201ENST00000481241 1165 ntBASIC2.14□□□□□ -2.07
VPS8Q8N3P4 AC087441.2-201ENST00000529141 262 ntBASIC2.14□□□□□ -2.07
VPS8Q8N3P4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS8Q8N3P4 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.14□□□□□ -2.07
VPS8Q8N3P4 U73479.1-201ENST00000618062 168 ntBASIC2.14□□□□□ -2.07
VPS8Q8N3P4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.14□□□□□ -2.07
VPS8Q8N3P4 HMGB1P5-201ENST00000255320 642 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AL596028.1-201ENST00000326971 197 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 MIR1287-201ENST00000408492 90 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 Z75741.2-201ENST00000417272 1167 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 IFNA20P-201ENST00000436840 528 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC023813.2-201ENST00000564321 469 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC008739.2-201ENST00000597006 317 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC079597.1-201ENST00000624306 508 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 AC130650.2-201ENST00000618736 2403 ntBASIC2.13□□□□□ -2.07
VPS8Q8N3P4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VPS8Q8N3P4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.12□□□□□ -2.07
VPS8Q8N3P4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS8Q8N3P4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
VPS8Q8N3P4 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.12□□□□□ -2.07
VPS8Q8N3P4 AC113155.1-201ENST00000511141 769 ntBASIC2.12□□□□□ -2.07
VPS8Q8N3P4 AP004371.1-201ENST00000525240 214 ntBASIC2.12□□□□□ -2.07
VPS8Q8N3P4 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.12□□□□□ -2.07
VPS8Q8N3P4 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AL391987.6-201ENST00000305671 199 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 SNORA7.1-201ENST00000363750 139 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 RNU6-53P-201ENST00000365367 106 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 TEX41-202ENST00000414256 604 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 OR51AB1P-201ENST00000429046 620 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 MTND3P6-201ENST00000485242 339 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 CIR1P1-201ENST00000524055 1133 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AC139103.1-201ENST00000534696 1030 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AC015849.6-201ENST00000605454 474 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AC011472.4-201ENST00000615848 491 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AC020923.1-201ENST00000624021 917 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
VPS8Q8N3P4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS8Q8N3P4 RNU2-68P-201ENST00000410878 191 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 AC007098.1-201ENST00000420122 367 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 AC009474.2-201ENST00000451383 136 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 AL139109.1-201ENST00000455491 297 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 LARP7P4-201ENST00000481075 878 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 AC105914.1-201ENST00000511798 226 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 MTCO1P47-201ENST00000523889 1271 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 COX6CP3-201ENST00000580869 223 ntBASIC2.1□□□□□ -2.07
VPS8Q8N3P4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS8Q8N3P4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS8Q8N3P4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS8Q8N3P4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS8Q8N3P4 SNORA40.6-201ENST00000391153 128 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 RPL23AP29-201ENST00000397284 453 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS8Q8N3P4 AC074117.2-201ENST00000417130 397 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 RPL7P18-201ENST00000478965 734 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 AC025768.1-201ENST00000510057 267 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 RNU1-92P-201ENST00000517017 135 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS8Q8N3P4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.09□□□□□ -2.07
VPS8Q8N3P4 GLUD1P4-201ENST00000590914 418 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 AL136363.1-201ENST00000605349 337 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS8Q8N3P4 AC106028.5-201ENST00000610332 395 ntBASIC2.09□□□□□ -2.07
VPS8Q8N3P4 uc_338.12-201ENST00000616344 181 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms