Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.46□□□□□ -1.54
SIX5Q8N196 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
SIX5Q8N196 AC093535.2-201ENST00000624769 2326 ntBASIC5.46□□□□□ -1.54
SIX5Q8N196 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SIX5Q8N196 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX5Q8N196 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 ZNF72P-201ENST00000425869 1908 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 Y_RNA.126-201ENST00000363382 111 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 RN7SKP113-201ENST00000363891 295 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 MIR301A-201ENST00000385261 86 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX5Q8N196 RNU2-3P-201ENST00000410144 191 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 EIF4A1P3-201ENST00000411521 244 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AL513331.1-201ENST00000411908 397 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC5.45□□□□□ -1.54
SIX5Q8N196 AL353621.1-201ENST00000418219 243 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC5.45□□□□□ -1.54
SIX5Q8N196 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX5Q8N196 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX5Q8N196 HSPD1P21-201ENST00000436541 245 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.45□□□□□ -1.54
SIX5Q8N196 RPL26P6-201ENST00000440913 438 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AL359073.1-201ENST00000448036 403 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 IFNWP4-201ENST00000453148 294 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AC097484.1-201ENST00000471148 389 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AC093852.1-201ENST00000503587 266 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX5Q8N196 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.45□□□□□ -1.54
SIX5Q8N196 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.45□□□□□ -1.54
SIX5Q8N196 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.45□□□□□ -1.54
SIX5Q8N196 AC125232.2-201ENST00000592457 143 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AC002545.1-201ENST00000592511 181 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AC006115.2-201ENST00000596823 202 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AC004805.2-201ENST00000605382 482 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 AC103858.2-201ENST00000621471 543 ntBASIC5.45□□□□□ -1.54
SIX5Q8N196 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.45□□□□□ -1.54
SIX5Q8N196 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SIX5Q8N196 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.45□□□□□ -1.54
SIX5Q8N196 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.45□□□□□ -1.54
SIX5Q8N196 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
SIX5Q8N196 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SIX5Q8N196 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SIX5Q8N196 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SIX5Q8N196 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.44□□□□□ -1.54
SIX5Q8N196 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SIX5Q8N196 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIX5Q8N196 AC004817.4-201ENST00000602396 3625 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SIX5Q8N196 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIX5Q8N196 AC126755.2-208ENST00000327792 462 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AC138969.1-213ENST00000331436 462 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SIX5Q8N196 RNA5SP326-201ENST00000363209 110 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 RNU4-70P-201ENST00000384579 139 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 RPL21P1-201ENST00000399532 476 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AL603908.1-201ENST00000406098 201 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 RPS16P5-201ENST00000406501 404 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AL513475.1-201ENST00000406602 315 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SIX5Q8N196 U3.35-201ENST00000408405 208 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 RNF10P1-201ENST00000418589 369 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 PGBD4P6-201ENST00000421501 610 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AC006946.1-201ENST00000429106 328 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 USP9YP7-201ENST00000436723 430 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 RANP8-201ENST00000444720 713 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC5.44□□□□□ -1.54
SIX5Q8N196 USP9YP32-201ENST00000452432 430 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AC104634.1-201ENST00000452720 462 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.44□□□□□ -1.54
SIX5Q8N196 AC113155.1-201ENST00000511141 769 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 APOOP4-201ENST00000513530 597 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 Y_RNA.687-201ENST00000516558 91 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 RNU6-1315P-201ENST00000517187 99 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AC144568.1-201ENST00000520139 137 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AC021006.3-201ENST00000530771 192 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.44□□□□□ -1.54
SIX5Q8N196 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.44□□□□□ -1.54
SIX5Q8N196 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SIX5Q8N196 AC083809.1-201ENST00000615051 472 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 AC099669.2-201ENST00000616549 437 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 MIR6758-201ENST00000620653 63 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 MAPK10-304ENST00000641341 3984 ntBASIC5.44□□□□□ -1.54
SIX5Q8N196 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SIX5Q8N196 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
SIX5Q8N196 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIX5Q8N196 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SIX5Q8N196 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
SIX5Q8N196 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms