Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC127455.1-201ENST00000565496 145 ntBASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 RPL23AP92-201ENST00000603609 255 ntBASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
NPAS3Q8IXF0 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 Y_RNA.357-201ENST00000365487 109 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 RNU4-30P-201ENST00000410245 143 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 DDX39BP1-205ENST00000422507 192 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 BX276092.6-201ENST00000430476 250 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AC099670.2-201ENST00000435130 321 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 SEPT7P4-201ENST00000437076 306 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AL357134.1-201ENST00000445848 426 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 BX276092.8-201ENST00000455722 250 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AC010326.1-201ENST00000462726 602 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 GLUD1P3-202ENST00000508551 200 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 Y_RNA.689-201ENST00000516589 107 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 TRAV28-201ENST00000557548 323 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AC009962.1-201ENST00000567327 3813 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 MIR4330-201ENST00000579077 105 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 SNORD39.2-201ENST00000579995 76 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 uc_338.18-201ENST00000615451 175 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 AC243829.7-201ENST00000633081 225 ntBASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NPAS3Q8IXF0 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC140134.1-201ENST00000511830 3544 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 RNA5SP453-201ENST00000362503 119 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 Y_RNA.569-201ENST00000384749 103 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 MIR1302-4-201ENST00000408701 150 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 RNU6-1064P-201ENST00000410626 104 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 COX6B1P1-201ENST00000415962 213 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 TMSB10P2-201ENST00000416049 131 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 MRPS21P2-201ENST00000424704 264 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 RPL30P11-201ENST00000495304 339 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC093767.1-201ENST00000504523 156 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC069113.1-201ENST00000517763 267 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC087369.1-201ENST00000520775 996 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 MIR4659A-201ENST00000580269 81 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 MIR4691-201ENST00000583764 85 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 AC023043.4-201ENST00000612081 449 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 uc_338.9-201ENST00000617424 182 ntBASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.47□□□□□ -1.53
NPAS3Q8IXF0 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
NPAS3Q8IXF0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.46□□□□□ -1.53
NPAS3Q8IXF0 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.46□□□□□ -1.53
NPAS3Q8IXF0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms