Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 DEFB131D-201ENST00000526803 184 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC079600.2-201ENST00000550076 130 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 GLUD1P4-201ENST00000590914 418 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 BBIP1P1-201ENST00000602999 279 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC093732.2-201ENST00000607950 274 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC004067.1-201ENST00000608733 700 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC107075.1-201ENST00000613695 314 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AL445264.1-201ENST00000621719 171 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 AC002064.3-201ENST00000623448 346 ntBASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC50Q8IVM0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC008568.2-201ENST00000623862 2313 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 MTND4P9-201ENST00000507819 1346 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AL079343.1-201ENST00000572358 1771 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 MIR620-201ENST00000385232 95 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AL136310.1-201ENST00000404926 654 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 USP9YP11-201ENST00000427537 717 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 EEF1A1P39-201ENST00000440791 250 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 MTND5P14-201ENST00000441481 1267 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AL121871.1-201ENST00000443413 436 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 RPS3AP12-201ENST00000443616 753 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 MTND1P31-201ENST00000449206 961 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC234775.1-201ENST00000454247 670 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC005410.1-202ENST00000460347 485 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 RNU6-714P-201ENST00000516963 103 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC087373.1-201ENST00000524920 491 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 CYCSP2-201ENST00000558168 301 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC020895.1-201ENST00000595362 272 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC021749.1-201ENST00000604322 607 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC006270.3-201ENST00000605967 1036 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AL158211.4-201ENST00000606988 584 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 AC002550.2-201ENST00000621246 394 ntBASIC2.75□□□□□ -1.97
CCDC50Q8IVM0 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 ZNF833P-201ENST00000424938 1494 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC005539.1-201ENST00000443768 1479 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AL672167.1-206ENST00000356293 943 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 RNU5A-1-201ENST00000362698 116 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 Y_RNA.192-201ENST00000363977 102 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 RNU6-1180P-201ENST00000364935 107 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 SNORA80E-201ENST00000384744 137 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 MIR491-201ENST00000384877 84 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 MIR144-201ENST00000384886 86 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 MIR325-201ENST00000385260 98 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 RNU6-1242P-201ENST00000391052 103 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 RPS12P2-201ENST00000439728 269 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 MTCO2P25-201ENST00000447065 681 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC007327.1-201ENST00000447461 264 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 ARPC3P5-201ENST00000448802 534 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 snoU109.3-201ENST00000459477 145 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 S100A11P2-201ENST00000467589 312 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 HSPE1P6-201ENST00000479457 291 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 RPL37P25-201ENST00000507308 276 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 RNA5SP367-201ENST00000516557 118 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC103783.1-201ENST00000520506 373 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 OR6C7P-201ENST00000547875 934 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC091057.3-201ENST00000602684 733 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC013553.2-201ENST00000604244 589 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC019159.1-201ENST00000605094 187 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AL157392.4-201ENST00000609756 345 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AL357080.1-201ENST00000617394 239 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AC010608.3-201ENST00000625048 527 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 OR4G2P-202ENST00000641004 1759 ntBASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC50Q8IVM0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.73□□□□□ -1.97
CCDC50Q8IVM0 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.73□□□□□ -1.97
CCDC50Q8IVM0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CCDC50Q8IVM0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
CCDC50Q8IVM0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms