Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PTCHD4Q6ZW05 MAPK10-373ENST00000641983 6772 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC073343.1-201ENST00000328239 651 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 Y_RNA.279-201ENST00000364763 95 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 RNU1-89P-201ENST00000384592 164 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AL136116.1-201ENST00000403591 381 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 RPS16P5-201ENST00000406501 404 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 RNU2-43P-201ENST00000410306 190 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AL590139.1-201ENST00000416267 400 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC099677.1-201ENST00000420575 175 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC018630.2-202ENST00000422992 927 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AL513185.2-201ENST00000425543 193 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AL157831.1-201ENST00000426134 473 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC093106.2-201ENST00000428212 385 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC011742.1-201ENST00000431448 434 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC004866.2-201ENST00000438285 481 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 PHBP16-201ENST00000446318 950 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC073415.1-201ENST00000449240 153 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 SNORD97-201ENST00000459187 142 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 GMFBP1-201ENST00000467831 427 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 RPS4XP13-201ENST00000483219 789 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC093278.1-201ENST00000494700 600 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 RPL31P61-201ENST00000496160 376 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 EIF4EP3-201ENST00000498782 656 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC111000.3-201ENST00000508057 576 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 LRRC34P2-201ENST00000514850 553 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 SNORD60.2-201ENST00000516883 86 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 SUB1P1-201ENST00000524415 382 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 OR5B19P-201ENST00000531766 928 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AL121603.1-201ENST00000553815 142 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC051619.2-201ENST00000559063 397 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC010525.2-201ENST00000590920 195 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC019193.2-201ENST00000610012 634 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC140479.6-201ENST00000633535 357 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC099654.5-201ENST00000636479 350 ntBASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.79□□□□□ -1.8
PTCHD4Q6ZW05 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-1284P-201ENST00000363701 100 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RNU6-1009P-201ENST00000390996 107 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AL133270.1-201ENST00000402635 279 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RNU2-41P-201ENST00000410991 178 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 CRYBB2P1-203ENST00000415709 538 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AL159169.1-201ENST00000421119 127 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RPL36AP53-201ENST00000432891 316 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 HMGB1P12-201ENST00000438594 598 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AF228730.2-201ENST00000438784 848 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 MTCO3P45-201ENST00000443036 613 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RNU7-182P-201ENST00000459009 62 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RN7SL98P-201ENST00000462271 300 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RPL7P47-201ENST00000497299 556 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RPL23AP55-201ENST00000498163 452 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC105417.1-201ENST00000514691 285 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 MTCO1P35-201ENST00000515270 228 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RN7SKP92-201ENST00000517266 244 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC100870.1-201ENST00000522035 505 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 OR5AL2P-201ENST00000532185 920 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 TRAV8-5-201ENST00000537369 341 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC018630.1-201ENST00000541376 925 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 MIR3690-201ENST00000580266 75 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 FGF7P1-201ENST00000582820 288 ntBASIC3.78□□□□□ -1.8
PTCHD4Q6ZW05 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms