Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 AC023512.1-201ENST00000444513 499 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AC090897.2-201ENST00000581715 130 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 OR4G1P-201ENST00000588632 938 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 MIR8081-201ENST00000611533 95 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AL355810.1-201ENST00000614629 552 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AL360181.4-201ENST00000621752 134 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AC068880.5-201ENST00000624331 290 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 OR1S1-201ENST00000624470 978 ntBASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CCDC171Q6TFL3 AC009812.4-201ENST00000569134 1805 ntBASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 AL627390.1-201ENST00000396055 340 ntBASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 RNA5SP233-201ENST00000459153 113 ntBASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 SNORA31.8-201ENST00000516327 108 ntBASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 SNORA25.15-201ENST00000516487 89 ntBASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 AC010678.1-201ENST00000614118 713 ntBASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CCDC171Q6TFL3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 SNORA3A-201ENST00000364113 130 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 RNU6-234P-201ENST00000365229 104 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 RNU6-233P-201ENST00000410845 141 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 BTF3P12-201ENST00000519620 469 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 TRAV11-201ENST00000539512 339 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 MIR3117-201ENST00000584034 78 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AL391813.2-201ENST00000609113 322 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AC016252.1-201ENST00000609721 474 ntBASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.03□□□□□ -2.08
CCDC171Q6TFL3 AC008669.1-201ENST00000565823 2178 ntBASIC2.03□□□□□ -2.09
CCDC171Q6TFL3 RNA5SP190-201ENST00000365222 118 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AL356320.2-201ENST00000417263 507 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AL645638.1-201ENST00000440519 361 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 COX6CP12-201ENST00000446748 202 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 SNORD13-201ENST00000459299 104 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AC079203.1-201ENST00000487972 404 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AC034222.1-201ENST00000494052 532 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AP001804.3-201ENST00000525146 880 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AC087481.2-201ENST00000565492 330 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AP000942.3-201ENST00000603702 160 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AC107214.2-201ENST00000608204 634 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 AC025016.1-201ENST00000616746 682 ntBASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
CCDC171Q6TFL3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 RNU6-1243P-201ENST00000364028 107 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 RNU6-461P-201ENST00000364195 107 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 Z98749.2-208ENST00000381646 500 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 MIR676-201ENST00000390702 67 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 RNA5SP56-201ENST00000410277 118 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 ARL2BPP3-201ENST00000421226 480 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC007560.1-201ENST00000426912 237 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 MIR3683-201ENST00000580847 82 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC124283.4-201ENST00000581815 456 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 FAM60CP-201ENST00000591086 664 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 HSPE1P7-201ENST00000604681 321 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC097372.4-201ENST00000625025 466 ntBASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC171Q6TFL3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2□□□□□ -2.09
CCDC171Q6TFL3 RNA5SP213-201ENST00000391031 106 ntBASIC2□□□□□ -2.09
CCDC171Q6TFL3 RNU6-193P-201ENST00000410977 107 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms