Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC019235.1-201ENST00000503847 207 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 SNORD27.1-201ENST00000516319 72 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RNU6-410P-201ENST00000517006 107 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RNA5SP291-201ENST00000517222 105 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 HIGD1AP1-201ENST00000550979 275 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RPL21P12-201ENST00000559810 515 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 MIR4277-201ENST00000578298 84 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 RN7SL690P-201ENST00000582087 240 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 MIR4715-201ENST00000584117 79 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC098848.2-201ENST00000588023 330 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC007363.1-201ENST00000604736 620 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC019193.2-201ENST00000610012 634 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC034102.8-201ENST00000615146 484 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC093648.1-201ENST00000623546 606 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC068137.3-201ENST00000639191 341 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 AC073869.6-201ENST00000640656 341 ntBASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PPP4R4Q6NUP7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 Y_RNA.554-201ENST00000384672 102 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 SNORA3C-201ENST00000408792 125 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 RPS20P14-201ENST00000412545 360 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 MTATP6P18-201ENST00000417994 673 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 RPS3AP44-201ENST00000425466 790 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 HIGD1AP11-201ENST00000438361 280 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC092473.1-201ENST00000441098 221 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 PIGFP3-201ENST00000441918 722 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC009220.1-201ENST00000451614 275 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 KC877373.1-201ENST00000479066 408 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AL160314.1-201ENST00000490836 438 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC023194.1-201ENST00000493084 308 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 PCBP2P3-201ENST00000509726 843 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC108043.1-201ENST00000512696 574 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 OR5B19P-201ENST00000531766 928 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC009643.1-201ENST00000532030 391 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AL163153.1-201ENST00000554223 283 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC034105.3-201ENST00000565294 442 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 HMGB1P6-201ENST00000569046 646 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC067959.1-201ENST00000604334 379 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC126118.1-201ENST00000607744 628 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC017083.3-201ENST00000609955 700 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 MIR7641-1-201ENST00000627518 61 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 MAPK10-322ENST00000641485 4530 ntBASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PPP4R4Q6NUP7 AC022336.2-201ENST00000568966 2538 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 GABRG2-229ENST00000641017 3628 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 BDP1P-201ENST00000582658 1990 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 RNA5SP447-201ENST00000363749 119 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 Y_RNA.409-201ENST00000383990 98 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 RNU1-89P-201ENST00000384592 164 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 MIR141-201ENST00000384975 95 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 RPS4XP8-201ENST00000402039 771 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 MIR548F1-201ENST00000408667 84 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC114491.1-201ENST00000416095 246 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC012498.1-201ENST00000424037 437 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC007919.1-201ENST00000429380 217 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 OR2B8P-201ENST00000432841 938 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC079781.2-201ENST00000446424 169 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 RPL23AP43-201ENST00000446445 471 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 PSPHP1-201ENST00000450062 261 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC093899.1-201ENST00000457984 376 ntBASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.06□□□□□ -1.76
PPP4R4Q6NUP7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 163.7 ms