Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RNU2-69P-201ENST00000516061 100 ntBASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 AC022616.4-201ENST00000522985 181 ntBASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 AC026371.1-201ENST00000551867 419 ntBASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 MIR5685-201ENST00000579080 79 ntBASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 RN7SL600P-201ENST00000581811 299 ntBASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 MIR8059-201ENST00000620427 81 ntBASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 AC019206.1-201ENST00000621938 425 ntBASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
COL13A1Q5TAT6 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 Y_RNA.39-201ENST00000362620 98 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 RNA5SP72-201ENST00000364442 117 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 SMIM11P1-201ENST00000369586 178 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 SNORA2.3-201ENST00000383920 135 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 SNORA41-201ENST00000384675 132 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 RNU2-23P-201ENST00000410545 195 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 RPL7P37-201ENST00000425095 738 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AC093106.2-201ENST00000428212 385 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AL669831.1-202ENST00000428504 417 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 PRDX3P3-201ENST00000447765 522 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 SUMO1P2-201ENST00000452524 304 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AC096745.1-201ENST00000509945 370 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 SCARNA20.4-201ENST00000516969 131 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 RNU6-323P-201ENST00000521915 107 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AL021879.1-201ENST00000611756 288 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AC007998.5-201ENST00000622938 237 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 AC243312.2-201ENST00000623340 601 ntBASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
COL13A1Q5TAT6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AP001273.1-201ENST00000624493 3152 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 RNU6-874P-201ENST00000362390 105 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 RNU6-214P-201ENST00000384130 107 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 RNU6-95P-201ENST00000384697 107 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 MIR659-201ENST00000384963 97 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 RNU6-823P-201ENST00000391042 103 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 RNU6-603P-201ENST00000411403 107 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 UBE2FP1-201ENST00000416536 447 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 RPS15AP40-201ENST00000419621 391 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 EIF4EP1-201ENST00000422311 642 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC099336.2-201ENST00000422457 254 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AL590632.1-201ENST00000424289 371 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 CEACAMP1-201ENST00000434624 1035 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 CYCSP43-201ENST00000438233 310 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AL359672.1-201ENST00000442302 409 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 RPL12P39-201ENST00000455456 496 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC099560.2-201ENST00000457554 255 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 SNORD125-201ENST00000459538 96 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AP001086.1-201ENST00000494882 321 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC097486.1-201ENST00000515331 210 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC103783.1-201ENST00000520506 373 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC110743.1-201ENST00000584870 478 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AC015967.1-201ENST00000619893 476 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AL589994.2-201ENST00000621124 579 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AL606534.2-204ENST00000635008 178 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 DDX10P1-201ENST00000448545 1933 ntBASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL13A1Q5TAT6 AP005435.3-201ENST00000531260 3198 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms