Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 AC233981.2-201ENST00000611524 1614 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 ZNF299P-201ENST00000406845 1804 ntBASIC5.81□□□□□ -1.48
CTC1Q2NKJ3 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 DNM1P47-203ENST00000571780 12667 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 MFSD8-239ENST00000641590 2479 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 RNU6-249P-201ENST00000363016 102 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 RNU6-80P-201ENST00000384195 107 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 MIR569-201ENST00000385228 96 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AL133388.1-201ENST00000404509 287 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 RN7SKP159-201ENST00000410657 292 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC079809.1-201ENST00000415468 276 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AL136126.1-201ENST00000473603 402 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 RN7SL591P-201ENST00000496150 292 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC113155.1-201ENST00000511141 769 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AP002001.1-203ENST00000534002 267 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC092490.3-201ENST00000545370 572 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 RPL10P14-201ENST00000565265 298 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 MIR4282-201ENST00000583613 67 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AL591926.4-201ENST00000616895 298 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 MIR6133-201ENST00000617057 108 ntBASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CTC1Q2NKJ3 AL592148.3-201ENST00000608771 2646 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 AC083843.3-201ENST00000623679 2186 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 MAPK10-328ENST00000641553 4009 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 Y_RNA.331-201ENST00000365267 102 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 SNORA16A-201ENST00000384342 137 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 AL357075.1-201ENST00000404107 726 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 RNA5SP494-201ENST00000410653 129 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 EI24P4-201ENST00000423683 1078 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 CRIP1P1-201ENST00000427567 185 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 BX679664.1-201ENST00000434429 253 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 AL137159.1-201ENST00000452808 512 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 RN7SL738P-201ENST00000470264 297 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 RN7SL432P-201ENST00000484057 298 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 Z99571.1-201ENST00000636677 394 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 AC010332.2-201ENST00000613083 1904 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 AC006206.1-201ENST00000544842 3387 ntBASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
CTC1Q2NKJ3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 RNA5SP123-201ENST00000363244 119 ntBASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 RNA5SP267-201ENST00000364893 126 ntBASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 RNA5SP87-201ENST00000384155 118 ntBASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 RNU6-1226P-201ENST00000384317 107 ntBASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 RNU6-933P-201ENST00000384424 107 ntBASIC5.78□□□□□ -1.48
CTC1Q2NKJ3 RNU6-45P-201ENST00000384471 107 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms