Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZNF876P-202ENST00000398732 1485 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 AC008669.1-201ENST00000565823 2178 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 TPTE2P4-201ENST00000258589 1605 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.19□□□□□ -1.9
SHROOM1Q2M3G4 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 RNA5SP68-201ENST00000363885 119 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 MIR9-1-201ENST00000385198 89 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 CR769776.1-201ENST00000441254 787 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 Z96811.1-201ENST00000445880 108 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AL031183.1-201ENST00000457667 207 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC090453.1-201ENST00000495560 436 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 RN7SKP43-201ENST00000516173 320 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AP001372.4-201ENST00000524889 472 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC087373.1-201ENST00000524920 491 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 NBEAP1-201ENST00000554452 979 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 MIR3921-201ENST00000577308 85 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC011260.1-201ENST00000578420 472 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 MIR3609-201ENST00000582661 80 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC106900.2-201ENST00000604994 317 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC012443.1-201ENST00000605605 231 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC007349.4-201ENST00000608114 532 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AL020991.1-201ENST00000612314 373 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 MIR6817-201ENST00000615588 66 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AP000484.1-201ENST00000620067 1252 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 AL022578.1-201ENST00000439330 1433 ntBASIC3.18□□□□□ -1.9
SHROOM1Q2M3G4 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 SNORD51-201ENST00000384320 80 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 SNORA67.4-201ENST00000384688 142 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 RPL21P3-201ENST00000395517 478 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 MIR1284-201ENST00000408337 120 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 ELOCP9-201ENST00000418624 239 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 RPL7P30-201ENST00000420888 709 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AL139421.1-201ENST00000423010 169 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC093151.1-201ENST00000427711 313 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 FTH1P1-201ENST00000437933 532 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 MTND3P1-201ENST00000441336 220 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 RPL23AP20-201ENST00000447965 421 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC146507.2-201ENST00000460608 476 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 COX7A2P2-201ENST00000505291 250 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 SNORA31.21-201ENST00000517180 77 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC245166.1-201ENST00000521012 253 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 OR5AK1P-201ENST00000524837 922 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 HPRT1P3-201ENST00000539521 576 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 MTND4P33-201ENST00000556706 766 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 HSPE1P3-201ENST00000559254 309 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC090695.1-201ENST00000561269 1222 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC022662.1-201ENST00000580252 331 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AL133507.1-201ENST00000605269 557 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC068787.1-201ENST00000623908 691 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
SHROOM1Q2M3G4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 SNORD56.5-201ENST00000364281 72 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 RNU6-757P-201ENST00000410334 100 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 MTATP6P27-201ENST00000416987 621 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 HMGN2P30-201ENST00000423237 256 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC084290.1-201ENST00000434995 374 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AL513043.1-201ENST00000439124 535 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 MTCO3P11-201ENST00000455103 774 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 BX322784.1-201ENST00000455793 1077 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 RNU7-136P-201ENST00000458819 69 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AP004217.1-201ENST00000480579 346 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 SRIP1-201ENST00000489235 288 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC010587.2-201ENST00000511727 448 ntBASIC3.16□□□□□ -1.9
SHROOM1Q2M3G4 AC010486.1-201ENST00000511793 424 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms